Pseudomonas aeruginosa PAO1-VE2, N296_4649
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1-VE2 genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACAGATGCTGCAAGCAGACCTGGCCAAGGCCGGCATCCAGCTGACCATCCGTTCCCTGGAATGGGGCGAGCTGCTCAAGCGTTCGAAGGCCGGCGAGCAC GACCTGTCGCTGCTTGGCTGGGCCGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGAACCTGAGCTGCGCCGCCGCCGAGTCGGGTGAAAACCAGG CGCGCTGGTGCGACAAGGACTTCGAGGCGCTGATGCGCAAGGCCCGCGAGGTGAGCGATCCGGCCGAGCGGGCGAAACTGTACGAGCAGGCCCAGGTGGT ATTCCACGAACAGGCCCCATGGATACCGCTGGCCTACCCGAAGCTGTTCAACGTCCGGCGGAACACGGTGCAGGGCTACGTGATCAATCCGTTGAGCAAC AACAACTTCGCCACCACCTCGGTGAAGCCGTAGAAGAACAAGGACCACAGCCCCGCCGCCAGCGGGGCGCACGGTCCGCGATGAGGAGTTACCCGCCACC
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| DNA Sequence for Gene |
>N296_4649
ATGCTTAGTTTCATTGCTCGACGACTGGGGCTGCTGATCCCCACCTTCTTCGGCGTGACCCTGCTCACCTTCGCGCTGATCCGCCTGATTCCCGGCGACC CGGTGGAAGTGATGATGGGCGAGCGCCGCGTCGACCCGCAGATGCACGCCGAGGCCCTGCACCGCCTGGGCCTGGACAAGCCGCTGTACCAGCAGTACCT GGACTATGTCGGCAACCTCGCCCAGGGCAACCTTGGAAAATCCATACGCACACATGAGCCTGTCTGGAATGAGTTTCTCACGCTATTTTCAGCCACCCTG GAACTTTCATTCGCAGCAATGCTTTTTGCCGGCACACTCGGCCTCCTAGCAGGAGTGGTAGCCGCACTCAAGCGAGGTTCGATTTTTGACCACGGAGTAA TGACAATATCTCTAGCGGGCTACTCAATGCCGATTTTTTGGTGGGGCCTGCTCTTGATCATGCTCTTTTCCGTTTCATTAGGCTGGACTCCTGTTTCTGA CCGTATCGGCGTGCTGTATGAGGTGGAGCCGAAGACCGGCTTCATGCTCATCGACACCCTGCTCTCCGACGAGGAAGGCGCGTTCCTCGACGCCGTGCGC CACCTGATCCTGCCGGCCATCGTGCTGGGCACCATCCCGCTGGCGGTGATCGCCCGCATGACCCGCTCGGCGATGCTCGAGGTCCTGCGCGAGGACTACG TGCGCACCGCCCGCGCCAAGGGCTTGTCGCCGGCCCGGGTGGTCTTCGTGCACGCCCTGCGCAACGCGCTGATCCCGGTGCTGACGGTGTTAGGCCTGCA GGTCGGCACCCTGCTCGCCGGCGCGGTGCTGACCGAGACCATCTTCTCCTGGCCGGGCATCGGCAAGTGGCTGATCGACGCCATCAGCGCTCGCGACTAC CCGGTGGTGCAGAACGGCATCCTGCTGGTCGCCACCCTGGTCATCCTGGTCAATTTCGTCGTGGACATCCTCTACGGCCTGGCCAACCCACGCATTCGCC ACCAACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAGCGAGCCGATGAACGCCATGCACAACGCTCCCGCCAGCGACCCGAGCCTGGTCTACCCGTCCCCGCTGAAGGAATTCTGGCAAGCCTTTACCCGGAA CAAAGGTGCCGTCGGCGGCCTGCTGTTCATGCTGCTGATCGTGTTCTGCGCGCTGTTCGCCCCCTGGGTCGCGCCCTACGATCCGAGCGAACAATTCCGC GACTTCCTGCTGACCCCGCCGTCCTGGCTGGAGGGCGGCCAGGCGCGTTTCCTGCTCGGCACCGACGAACTGGGCCGCGACCTGCTCTCGCGGCTGATCC ACGGCGCCCGCCTGTCGCTGCTGATCGGCCTGTCCTCGGTGGTGATCTCGCTGGTCCCCGGCATCCTCCTCGGCCTGCTCGCCGGCTTCTCGCCGAACCG TGCCGGGCCGCTGATCATGCGCCTGATGGACATCATGCTGGCGCTGCCGTCGCTGCTGCTGGCGGTGGCCATCGTGGCGATCCTCGGCCCAGGCCTGATC
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| Amino Acid Sequence |
>binding--dependent transport system inner membrane component family protein
MLSFIARRLGLLIPTFFGVTLLTFALIRLIPGDPVEVMMGERRVDPQMHAEALHRLGLDKPLYQQYLDYVGNLAQGNLGKSIRTHEPVWNEFLTLFSATL ELSFAAMLFAGTLGLLAGVVAALKRGSIFDHGVMTISLAGYSMPIFWWGLLLIMLFSVSLGWTPVSDRIGVLYEVEPKTGFMLIDTLLSDEEGAFLDAVR HLILPAIVLGTIPLAVIARMTRSAMLEVLREDYVRTARAKGLSPARVVFVHALRNALIPVLTVLGLQVGTLLAGAVLTETIFSWPGIGKWLIDAISARDY PVVQNGILLVATLVILVNFVVDILYGLANPRIRHQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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