Pseudomonas aeruginosa PAO1-VE2, N296_3266 (wbpE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1-VE2 genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTGCACATCTGTGCAGGTGCCCGGATTGGCGCAGGGGTTTCGTTGGGTCAGAACGTATTCGTCGGCAACAAGGTCGTTATTGGTGATCGCTGCAAGATCC AGAACAACGTGTCGGTATATGACAATGTCACTCTCGAAGAGGGCGTGTTCTGCGGGCCGAGCATGGTATTTACCAACGTTTACAACCCCCGCTCGTTGAT CGAGCGCAAGGATCAGTACCGTAACACGTTGGTAAAAAAAGGTGCCACGCTTGGTGCCAACTGCACTATCGTCTGTGGCGTGACTATTGGTGAATATGCC TTCGTGGGTGCGGGTGCGGTCATTAACAAGAATGTTCCATCTTATGCCCTGATGGTAGGCGTGCCCGCTCGACAGATTGGTTGGATGAGCGAATTCGGTG AGCAGCTGCAGCTGAACGAGCAGGGCGAAGCTGTCTGCTCACACTCCGGTGCGCGCTATGTACTCAATGGAAAGATCCTGAGCAAGGTGGACGTGTGACC
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| DNA Sequence for Gene |
>N296_3266
|wbpE
ATGATTGAATTCATCGACCTGAAGAACCAGCAAGCGCGTATCAAGGACAAGATCGATGCCGGTATCCAGCGCGTGCTGAGACACGGGCAGTACATTCTTG GCCCGGAAGTCACTGAGCTTGAGGATCGCCTCGCCGATTTCGTCGGCGCTAAGTACTGCATCAGTTGCGCCAACGGTACTGACGCTCTACAGATTGTGCA GATGGCCTTGGGTGTTGGCCCAGGTGACGAAGTAATCACCCCTGGTTTTACTTATGTTGCGACAGCGGAGACCGTCGCGCTTTTGGGAGCCAAGCCGGTT TACGTGGATATTGATCCACGCACCTACAATCTTGATCCGCAGTTGCTGGAGGCTGCGATCACACCGCGTACGAAGGCTATCATTCCTGTTTCGCTGTATG GCCAGTGTGCAGACTTCGATGCAATCAACGCCATTGCCTCCAAATATGGTATCCCTGTCATTGAGGATGCTGCACAGAGCTTCGGTGCTTCGTACAAGGG TAAGCGTTCTTGTAATCTGAGTACCGTTGCCTGCACCAGCTTCTTCCCGAGCAAACCGTTGGGTTGCTATGGGGATGGTGGAGCGATCTTCACTAACGAC GATGAACTGGCTACTGCTATTCGTCAAATTGCCCGGCATGGTCAGGACCGCCGCTATCATCACATTCGTGTGGGGGTGAATAGTCGGTTGGACACATTGC AGGCTGCGATTCTTCTACCGAAGCTTGAAATTTTCGAGGAGGAGATTGCGTTGCGCCAGAAGGTAGCCGCGGAGTATGACCTATCACTGAAACAGGTCGG TATCGGCACGCCGTTTATTGAAGTGAATAACATCAGTGTTTATGCCCAGTATACGGTGCGTATGGATAATCGAGAGTCTGTTCAGGCTTCTTTGAAAGCT GCCGGGGTTCCAACTGCTGTGCATTACCCTATTCCGCTTAATAAGCAGCCTGCTGTTGCGGATGAGAAAGCGAAACTACCAGTGGGTGACAAGGCTGCTA CTCAAGTAATGAGCCTACCCATGCATCCCTATCTGGATACGGCATCCATCAAAATCATCTGTGCTGCGTTGACGAATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGGATGTATATACTTGCTCGAGTCGACAGGTCTATTCTGCTGAACACAGTGTTACTGTTTGCTTTCTTTTCAGCGACAGTGTGGGTGAATAATAATTATA TCTATCATCTCTATGATTATATGGGGTCTGCGAAAAAAACTGTCGACTTCGGCTTGTATCCGTACTTGATGGTCTTGGCGCTCATCTGTGCCCTGTTGTG TGGAGGGGCAATTCGCAGGCCAGGTGATCTGTTAGTTACATTATTAGTTGTAATACTTGTTCCTCATTCATTGGTTCTTAATGGAGCTAATCAATATTCT CCGGATGCGCAACCATGGGCTGGCGTGCCTCTGGCAATTGCTTTTGGTATTTTGATCATCGGCATTGTCAATAAGATAAGATTCCATCCGCTAGGTGCAT TGCAGCGAGAAAACCAAGGAAGGCGAATGTTAGTGCTACTGTCAGTACTCAACATAGTAGTGCTTGTGTTTATTTTCTTTAAAAGCGCTGGTTATTTTTC
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| Amino Acid Sequence |
>UDP-2-acetamido-2-dideoxy-d-ribo-hex-3-uluronic acid transaminase, wbpE
MIEFIDLKNQQARIKDKIDAGIQRVLRHGQYILGPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETVALLGAKPV YVDIDPRTYNLDPQLLEAAITPRTKAIIPVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPSKPLGCYGDGGAIFTND DELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIFEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMDNRESVQASLKA AGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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