Pseudomonas aeruginosa PAO1-VE2, N296_2801
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1-VE2 genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCAAGGCCAACGGCTACCGCGACTATGCGGCAGACACCGTGTGGATCCTGGAGCTGGTCACCGGCGCCCAGGGCGCCGGCTTCTCCCTGGAGGAGATCGC TCGCCTGCTGCCGAGCGGCGACGGCGCCTGGCAGCACGACGAGCTGCTCGAAGGCTTGCGCCGCAAGGTGGCCGAGATCGAGGCCCTGCAACGACGCCTG GAACAGAACAAGGCACAATTGCTGGTGGCCATCGAAAGCATCGAGAACAAGCCGGACGGTCTGCAGTGCACGGAAAACACCCAGCGCGTGCTGGAGCGCC TGCGCGAGGAAGGCCCTCCACAGACGGTCGGGCGTCCACGGCAAACCCGCTCGCGGGGGGCCTCTTCCACGCCGGCGGAGCAGCGGCTTTCCGACGCTTG ACCTTGAAGTCGACTTGAATCTTAGAGTGACGCCAACCCACCCGGACAGCCTGCCGAAACCGGCTGCCGACGGGATCACTCACCGAGGAAGGTCAACGCA
|
|
| DNA Sequence for Gene |
>N296_2801
ATGACCAAGCGCATCCTGCACGTCGTCACCAACGTCGCCCACTATGCCGATCCGACCCAGCCCACCGGGCTGTGGCTGTCGGAGTTGACCCATGCCTACG AGATCTTCGCCGCCCGGGGCTACCAGCAACGCCTGGTCAGCCCCCGCGGCGGCGAGTCACCGCTGGAGCCGCGCGCCCTCGGCTGGCCCCACGCCGACGC CAGCGCCAAGGCCTGGCTGGCCGACGAGACGCGCCTGGCGCTGCTGGCCGACACTGCCGCTCCCGAGCAGGTCGACGCGGAGGCGTTCGACGCCATCTAT TTCACCGGCGGCCACGGCGTGATGTGGGACTTCCCCGACGACGCCGGGCTGCAGCACCTGACCCGCGAGATCTACCAGCGCGGCGGCATCGTCTCGTCGG TCTGCCACGGCTATTGCGGCTTGCTCAACACACGCCTGGACGATGGCCGCCTGCTGGTCGCCGGGCGCCGCCTCACCGGCTACTCCTGGATCGAGGAAGT GCTCGCCGGGGTCGCCCGCAAGGTGCCGTACAACGTCGAGGAAGAAATGAAACGACGCGGCGCGCTCTACGAAAGAAGCCTGCTGCCGTTCACCAGCAAG GTGGTGGTCGACGGCCGCCTGGTCACCGGGCAGAACCCGCAGTCAGCCAAGGCCACGGCCGAGCAGGTGGCCGCCCTGCTCGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACGCACGGCGCGTCAGTCCTGCGCGCGCCTCATCTGGAAGTCGTGGCGCCGCTTGCCGATGAAGAACGATTCTGCATCGTCCCGTCGGCCAGGGGCCGCA GGATCGTCGCAGTGCTGGTCGTGTGGTAGGGGTCGAACTCGTCGAAGGGCGACGCGGCGGCCTACGCCAGCGGCTTGAGCATGAGGAAGTTGCGCACGCT GTAGTAACCCTGCGAATCCTGCCAGTCGAGAGCGGCCAGGTTCTGCATGCCGGCCTCCCACGGCTGGTTGTCGAACAGCGCCTCCACCGTGCGCTGGTTG CCGAAGGCACAGAAGAAATGCCGGAACCAGTGCAGGCGCGCGTCCAGCGGCTCGGTGCGGATCGCCCGCTCGATGCTCGGGAACAGCCCGACCGGCAGCG GCGGCGCCTTGCCCTCGGCGCCGCGTAGGCCGAGGTTGCCGATATGCACCTCGAAACGCCGCTCGCCGATCTCCCAGGTCTCCACCATCACCTGGTCCTC
|
|
| Amino Acid Sequence |
>hypothetical protein
MTKRILHVVTNVAHYADPTQPTGLWLSELTHAYEIFAARGYQQRLVSPRGGESPLEPRALGWPHADASAKAWLADETRLALLADTAAPEQVDAEAFDAIY FTGGHGVMWDFPDDAGLQHLTREIYQRGGIVSSVCHGYCGLLNTRLDDGRLLVAGRRLTGYSWIEEVLAGVARKVPYNVEEEMKRRGALYERSLLPFTSK VVVDGRLVTGQNPQSAKATAEQVAALLG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|