Pseudomonas aeruginosa PAO1-VE2, N296_2491
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1-VE2 genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCCGACAGGGCCGGCGAACTGCGGGTGATCGCCGGACGCTACGGCCGCCACCAGGGGCCGGCGCTGACCCACTCGCCGCTGGCGGTCTGGGACGTGCAG CTGAAGGCCGGCAAGCACCTCGCCCTCGACCTGCCCAAGGGACATACCTGCGCCGTGGTGGTCCTGCGCGGCACCCTCGCGGTCGGCGACGAGATCGTTC GCGAAGCCCAGGTCGCCCTGCTCGACCGCGACGACCCGCGGCTGGAACTGGAAGCCAACAACGACGTGCAGTTGCTGGTGCTCAGCGGCGAGCCGCTGGA CGAGCCGATCATCGGCTATGGCCCCTTCGTGATGAGCAGCCGCGAGGAAATCGACCAGGCCATCGAGGACTTCGAGAACGGGCGCTTCATCCGCGCCCAC TGAAGTCCGCCCCCCTACGACATGGCCCGCGCAGGAAGCGCGGGCCCGGCCGGGCTTTGCCCGAAATTCACGGACGACCACCCTGCAAGAGGAAATGGAA
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| DNA Sequence for Gene |
>N296_2491
ATGAGCGCTCCCGCCAACTTCAACGGCCAGACCCCGAAGATCGATCCGGCCAACGCCGCCATGTTGCTGATCGACCACCAGAGCGGCCTGTTCCAGACGG TCAAGGACATGCCGATGACCGAACTGCGCGCCAACGCCACCACCCTGGCCAAGGTCGCCACCCTGGCGAAGATCCCGGTGATCACCACCGCCTCGGTACC GCAGGGCCCCAACGGCCCGCTGATCCCGGAGATCCACGAGGCCGCGCCGCACGCCCAGTACGTCGCGCGCAAGGGTGAGATCAATGCCTGGGACAACCCG GAATTCGTCGCCGCGGTGAAGGCCACCGGCAAGAAGCAACTGATCATCGCCGGCACCATCACCAGCGTGTGCATGGCCTTCCCCAGCATCGCCGCGGTAC ACGACGGCTACCAGGTATTCGCGGTGATCGACGCCTCCGGCACCTACTCCAAGATGGCCCAGGAAATCACCCTGGCACGGGTGGTCCAGGCCGGCGTGGT GCCGATGGACACCGCCGCGGTCTGCTCGGAAATCCAGCGTACCTGGAACCGCGACGACGCCGTGCAGTTCGCCGAAGCCTACAGCGCGGTATTCCCGCAC TACCAACTGCTGATCGAGAGCTACGCCAAGGCCCAGGCCGTGGTCAACAACCACGAGCAACTGGATTCGCAGCGCAAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCATGGGAAGGAAGGGGCTGCACGCCCCTTCTTTTGCCGAGCAGGAGCCTGGTGGACAGCAACGACTACGGACCGGACCCATGCCTGATTCCTCCATGA AGCGCGGGGCTACGCTCTGCCTTGCCCTTGCCATAGGTCCGGGCTCGACCCTCGCCGACGACTCCCTGGGCCATCGCGACAACATCAGCACCGGCCTGAA CCAGCGGCAGAAAGCCGAAATGAAGGTGCCGCCGGGCTTCGTCGAAGGCTCGACGCTGAACGGTTTCATCCGCAACTACTATTTCGCCCGCGACAACCAC GACACCCCGTCCCGCCGCGACCAGCGCGAATGGGCCCAGGGCCTGATGCTGTCGTTCCGCTCCGGCTATACCGACACGCCGATAGGCATCGGCCTGGATG CGCACGCCTTCTACGGCCTGCGCCTGGACGGCGGTGGCGGCAGCGGCGGTGCCGGCGTGCTGCCGCTGGACTCCGCCGGTCGCCCCGCCGACAGCTTCTC
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| Amino Acid Sequence |
>isochorismatase family protein
MSAPANFNGQTPKIDPANAAMLLIDHQSGLFQTVKDMPMTELRANATTLAKVATLAKIPVITTASVPQGPNGPLIPEIHEAAPHAQYVARKGEINAWDNP EFVAAVKATGKKQLIIAGTITSVCMAFPSIAAVHDGYQVFAVIDASGTYSKMAQEITLARVVQAGVVPMDTAAVCSEIQRTWNRDDAVQFAEAYSAVFPH YQLLIESYAKAQAVVNNHEQLDSQRK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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