Pseudomonas aeruginosa PAO1-VE13, N297_1379
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1-VE13 genome. [Details] | |
| DNA Sequence Upstream of Gene |
TTCTACGTCAACTACTTCCGCTCGATCCCGCTGCTGCTGGTGATCACCTGGTTCTACTTCGCGGTGCCCTTCATCCTGCGCTGGATCACCGGCGAGGACA CCCCGGTGGGGGCGTTCACCTCCTGCCTGGTGGCCTTCATGATGTTCGAGGCGGCCTACTACTGCGAGATCGTCCGCGCCGGCATCCAGGCCATCCCGAA AGGCCAGATGGGCGCCGCCCAGGCACTGGGCATGACCTACGGGCAGACCATGCGCCTGGTGATCCTGCCGCAGGCGTTCCGCAAGATGACCCCGCTGCTG CTGCAACAGAGCATCATCCTGTTCCAGGACACCTCGCTGGTCTATACCGTCGGCCTGATGGACTTCCTCAATTCGGCCCGTTCGCGCGGCGACATCATCG GCCAGGCCAACGAGTTCCTGATTTTCGCCGGCCTGGTCTACTTCGTCGTAAGCTTCACCGCCTCGTTCGCCGTCAAACGTCTGCAGAAAAGGTTAACCGT
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| DNA Sequence for Gene |
>N297_1379
ATGATTTCCATCAAGAATGTCAGCAAGTGGTATGGCGACTTCCAGGTCCTGACCGACTGCTCCACCGAGGTTGCGAAAGGCGAAGTGGTGGTGGTCTGCG GGCCGTCGGGCTCGGGCAAGTCGACCCTGATCAAGTGCGTCAACGCACTGGAACCCTTCCAGAAGGGCGACATCGTCGTCGACGGCACCTCCATCGCCGA TCCGAAGACCAACCTGCCCAAGCTGCGCTCGCGGGTCGGCATGGTGTTCCAGCATTTCGAGCTGTTTCCCCACCTGAGCATCACCGAGAACCTGACCATC GCGCAGATCAAGGTACTCGGCCGCAGCAAGGAAGAAGCCACCAAGAAGGGCCTGGCCCTGCTCGAGCGTGTCGGTCTCAAGGAGCACGCGCACAAGCACC CCGGCCAGCTCTCCGGCGGCCAGCAGCAGCGCGTGGCGATCGCCCGCGCGCTGGCGATGGACCCGGTGGTGATGCTGTTCGACGAGCCGACCTCGGCGCT CGACCCGGAAATGGTCAACGAAGTGCTCGACGTGATGGTCCAGCTGGCCCACGAAGGCATGACCATGATGTGCGTGACCCACGAGATGGGCTTCGCGCGC AAGGTCGCCAACCGGGTGATCTTCATGGACCGCGGGCAGATCGTGGAAGACTGCGAGAAGGAGGAGTTCTTCGGCGACGTCAGCGCCCGCTCCGAACGCG CCCAGCAGTTCCTCGCCAAGATCCTCCCGCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGTACCCGCCCTCGCCGGCCCGCCCGGCGGGGGCCTGCTCCACCCTCGCCTGCGATAACAATAAATAGGGAAAGCCCATGCAACCTGTGCTCTTCAGAAC CCTGTCCCTCGGCGTCGCCATTGCCGCCGCATCCTCCTCGGCCTTCGCCGCCACGCTCGACGGCGGCGCCGTCGCCGCGCCCGACGAGTACGGCGCCAAG GTCGCCGCGCAGATCCTCAAGGCCGGCGGCAACGCGGTGGACGCCGCGGTGGCCACCGCCTTCACCCTGGCGGTCACCTACCCCGAGGCCGGCAACATCG GCGGCGGCGGCTTCATGACCCTGTACATGGACGGCAAGCCGTACTTCCTCGACTACCGCGAGGTGGCGCCGAAGGCCGCGAGCAAGACCATGTACCTGGA CGACAAGGGCGAGGTGATCGAGAACCTCAGCCTGGTCGGCGCCAAGGCCGCCGGCGTGCCGGGCACCGTGATGGGCCTCTGGGAAGCCCACAAGCGGTTC
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| Amino Acid Sequence |
>ABC transporter family protein
MISIKNVSKWYGDFQVLTDCSTEVAKGEVVVVCGPSGSGKSTLIKCVNALEPFQKGDIVVDGTSIADPKTNLPKLRSRVGMVFQHFELFPHLSITENLTI AQIKVLGRSKEEATKKGLALLERVGLKEHAHKHPGQLSGGQQQRVAIARALAMDPVVMLFDEPTSALDPEMVNEVLDVMVQLAHEGMTMMCVTHEMGFAR KVANRVIFMDRGQIVEDCEKEEFFGDVSARSERAQQFLAKILPH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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