Pseudomonas chlororaphis PA23, EY04_RS30820
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis strain PA23, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCGCATCAGGATCACGTCCAGTTCGCTCAGGGCGCTGTCGGTCTCGGCCTCCAGCTCGAACCACTTGTGCGGGTCGGCGAACACCTTCAGCGGACGCATC CGCGCCCGGGCCACGCCACCGGTCGCCTGGTACAGGTCGCGCTGCTCCATATAGAACAGGGTCCAGCCGCGCTCCTGGGCGGCCAGCAGCATGGCCAGCG AGCTGTCCTTCTTGTAGGAGATGCTGGCGATAGGGTCCATGACAATCCCGACGCGAACGCTCATGGGCGGTTTCCTCGAAAATTAGTGGGCGCAATGGCT TGAAAAAGTGGCGTCAGAGTGGCGCCCGGGCGGTTCCCGGTCAAGGAAAAACCACCGCGCCGGCCGGCCGATAGATTGCATGGGGAGAGTATGCTAAAAA GGCTCGCATGCCGTGCTCAGGCCTTGAACATCAAGGGCTTGAGGCATTGGCCACCAGTACGGGCAGAAAATCGATTCGCTGTGGCGATGGTAGAGCAGAT
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| DNA Sequence for Gene |
>EY04_RS30820
ATGGAACAGCAATCCAGCGCCCTCAAGGTGATGGTGATCGATGATTCGAAGACGATTCGCCGCACGGCAGAAACGCTGTTGAAGAATGTGGGCTGTGAAG TCATCACCGCGGTCGACGGTTTCGAGTCCCTGGCCAAGATCGCCGACAACCACCCGGACATCATCTTCGTCGACATCATGATGCCGCGGCTCGATGGCTA TCAGACCTGCGCGCTGATCAAGAACAACAGCGCGTTCAAGTCCACGCCGGTGATTATGCTGTCCTCCAAGGACGGTCTGTTCGACAAGGCCAAGGGTCGC ATCGTCGGCTCTGACCAGTTTTTGACCAAGCCTTTCAGCAAGGAAGAGCTGCTGAGCGCGATCAAGGCCCATGTGCCGGGGTTCGCCGCAGTAGAACAAG CACATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTCCGGCCAGCGGGCCGCACGCCTATTCGTATGGGGAAGACCATGGCTCGTATTCTGATCGTCGATGACTCGCCGACTGAAATGTACAAACTGACCGGC ATGCTGGAAAAGCATGGCCATGAAGTCCTGAAGGCCGAAAACGGCGCCGACGGCGTGGCCCTGGCGCGCCAGGAAAAGCCCGACGCGGTCTTGATGGACA TCGTCATGCCCGGCCTCAATGGCTTCCAGGCCACCCGTCAGTTGACCAAGGACGCGGAAACCAGCCATATCCCGGTGATCATCATCACCACCAAGGATCA GGAAACCGACAAGGTCTGGGGCACTCGCCAGGGCGCCAAGGATTACCTGACCAAGCCGGTCGACGAAGACACCCTGATCAAGACCCTGAACAACGTCCTG GCCGGCTGACCGCCCGCGCCATGGCCGAGTCGCAAACCGCCTTCGAACTGCTGCTCGAGATCGACCAGCGCTGCCGCCTGCTGGCGGCCGACCTGCCTTC
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| Amino Acid Sequence |
>transcriptional regulator
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAVDGFESLAKIADNHPDIIFVDIMMPRLDGYQTCALIKNNSAFKSTPVIMLSSKDGLFDKAKGR IVGSDQFLTKPFSKEELLSAIKAHVPGFAAVEQAH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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