Pseudomonas chlororaphis PA23, EY04_RS28850
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis strain PA23, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACCGAGCCGGACGGCAATGTCAGCATCGTTCTGGGTCAGCACCATATCCGTGCGACCACCGGCGAGTTCACCTTCACTTCCAAGCTGGTCGACGGCAAGT TCCCGGACTACGAGCGTGTGCTGCCGAAGGGCGGTGACAAGCTGGTACTGGGCGACCGTCAGGCGCTGCGCGAAGCCTTCAGCCGTACCGCGATCCTGTC TAACGAGAAGTACCGCGGTATCCGTCTGCAACTGGCCAACGGTCAGCTGAAAATCCAGGCCAACAACCCGGAGCAGGAAGAGGCGGAAGAAGAAGTAGGC GTGGAATACAACGGCGGTTCGCTGGAGATCGGCTTCAACGTGAGCTATCTGCTCGACGTGCTGGGCGTGATGACCACTGAACAGGTACGCCTGATCCTGT CCGATTCCAACAGCAGTGCGCTGGTGCAGGAATCCGACAACGACGACTCGGCCTACGTTGTCATGCCGATGCGCCTGTAATCATGCTCAGCAGAAGCTAG
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| DNA Sequence for Gene |
>EY04_RS28850
ATGTCCCTCAGTCGCGTCTCGGTCACCGCGGTGCGCAATCTGCACCCGGTGACCTTCTCCCCCTCCCCCCGCATCAACCTCCTCTACGGCGCCAACGGCA GTGGCAAAACCAGCGTGCTGGAAGCCATCCACTTGCTGGGGCTTGCTCGCTCGTTTCGCAGTGCCCGTTTATTGCCGGTGATCCAGTACGAACAACTCGC GTGTACGGTGTTCGGCCAGGTCGAGCTGGCGGAAGGAGGACACAGCAGCCTGGGGATATCTCGCGATCGCCAGGGTGAATTCCAGATCCGCATCGACGGG CAGAACGCCCGCAGTGCCGCGCAGCTGGCGGAGATCCTGCCCCTGCAGTTGATCAACCCGGACAGTTTCCGCTTGCTGGAAGGCGCACCCAAAATCAGGC GCCAGTTCCTCGATTGGGGCGTGTTCCACGTGGAACCCCGCTTCATGTCAACCTGGCAGCGCTTGCAGAAGGCCCTGCGGCAGCGGAACTCATGGCTGCG GCATGGTACACTTGACGCCGCTTCGCAAGCAGCCTGGGACAGGGAGCTGTGTCAGGCCAGCGCTGAAATTGATGAATACCGCCGCGCTTATATCAAAGCC TTGAAACCAGTCTTTGAGCGGACCTTGAGCGAGCTGGTAGAGCTCGAGGGCTTAACGCTTAGCTATTACCGTGGTTGGGATAAAGAGCGAGAGCTCAGTG CAGTGCTCGCGACATCCCTCCATCGTGATCAGCAAATGGGTCATACCCAGGCCGGCCCCCAACGTGCTGATTTGCGTCTCAGGTTGGGCGCACACAACGC TGCGGACATCTTGTCCCGCGGTCAGCAGAAGTTGGTGGTCTGTGCCTTGCGGATCGCCCAGGGGCACCTGGTCAGCCAGGCCCGGCGCGGTCAGTGTATT TATCTGGTGGATGACTTGCCGTCCGAGCTGGACGAGCAGCATCGCCGCGCACTTTGTCGCTTGTTGGAAGACTTACGCTGCCAGGTGTTCATCACCTGTG TAGACCACGAATTATTGAGGGAAGGCTGGCAGACGGAAACGCCAGTTGCCCTGTTCCACGTGGAACAGGGCCGTATCACCCAGACCCACGACCATCGGGA GTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGCATGAGCGAAGAAAACACGTACGACTCGAGCAGCATTAAAGTGCTGAAAGGTTTGGATGCCGTACGCAAACGTCCCGGTATGTACATTGGTGACACC GACGATGGCAGCGGTCTGCACCATATGGTGTTCGAGGTGGTCGATAACTCGATCGACGAAGCTCTGGCCGGCCATTGCGACGACATCAGCATCATCATCC ACCCGGACGAATCCATTACCGTGCGTGACAACGGTCGCGGCATCCCGGTAGACGTGCATAAAGAAGAAGGCGTGTCCGCGGCCGAGGTCATCATGACCGT GCTGCACGCTGGTGGTAAGTTCGACGACAACTCCTACAAAGTATCCGGCGGTCTGCACGGTGTGGGTGTGTCGGTAGTGAACGCCCTGTCCGAAGAACTG GTCCTGACCGTTCGCCGCAGCGGAAAGATCTGGGAACAGACCTACGTTCACGGTGTGCCTCAGGCGCCTATGGCGATCGTCGGTGACAGCGAAACCACCG
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| Amino Acid Sequence |
>DNA recombination protein RecF
MSLSRVSVTAVRNLHPVTFSPSPRINLLYGANGSGKTSVLEAIHLLGLARSFRSARLLPVIQYEQLACTVFGQVELAEGGHSSLGISRDRQGEFQIRIDG QNARSAAQLAEILPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFMSTWQRLQKALRQRNSWLRHGTLDAASQAAWDRELCQASAEIDEYRRAYIKA LKPVFERTLSELVELEGLTLSYYRGWDKERELSAVLATSLHRDQQMGHTQAGPQRADLRLRLGAHNAADILSRGQQKLVVCALRIAQGHLVSQARRGQCI YLVDDLPSELDEQHRRALCRLLEDLRCQVFITCVDHELLREGWQTETPVALFHVEQGRITQTHDHRE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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