Pseudomonas chlororaphis PA23, EY04_RS27925

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain PA23, complete genome. [Details]
DNA Sequence Upstream of Gene
ATAGTGCCGCTGGAAGTCAGTGAGGAAGGCCGCACCACGGAGTTTCTGCTGGTGCCGTATTTCGGCGCCTGTATCCACGTACCGCCACCGCCCTCGAACC AGATCGTGCACGTGAAAAGCGAGGTCGGCGTGAAGCTCGACGAGCTGTATCAGCCGTACTGGATCGAGGGGCCGATGCAGGTCAAGGCGTCCACCAGCGA CATCGCCGACGCGGGTTACCAGATGGAAGCGCAGAAGATCTACGTGTACGAATTGCAGGAGTGAACCGTCGGTTTTGCAGTGCCGTACATGACCTCATCG CGAGCAAGCTCGCTCCTACAGGGAACTGCATTGTTCATGTAGGAGCGAGCTTGCTCGCGATCGATTCCAAAGCGCCCGGAGCGCCCCCCGAGCGCCTCGC TCCCACGCTGATCCGGTTTTCATTGAGCTGAGTCAAAGCCTGTTCCTTGACGATCCTTACCATTGGACCTAGCCAACTCGAATCGTCCTTTGGAGCTCCC
DNA Sequence for Gene
>EY04_RS27925
ATGCACAAGTCCCTGCTCAGCGCCTCCCTGTTCGCGCTCGCGCTCGCCGCCCCGCTCGCCCACGCCCACGAAGCGGGCGACATCATCGTTCGCGCCGGTG CCATCACCGTCAATCCGAAAGCCGACAGCGGCGACGTCAAGGTCGACCGCGGTCCGTTGGCCGGTGCCAACCTCGGCGGCAAGGCGACCATGAGCAGCGA CACCCAGCTGGGCCTGAACTTCGCCTACATGCTGACCAACAACATCGGCATCGAACTGCTCGCGGCCACGCCGTTCGAGCATGACGTGAAGCTCAAGGGC ACCGCGCTGGACGCCGCCAACGGCAAGCTCGGTACCCTCAAGCACCTGCCACCGACCCTGAGCGTCGTGTACTACCCGCTGGACCACAAGGCCGCTTTCC AGCCTTACGTGGGTGCCGGTATCAACTACACCTGGATCTATGACGAGCACGTCGGCAGCCGCGCCAGCGCCGCCGGTTTCGACAACTTCCGGGCGAAGAA CTCCTGGGGCCTGGCCTGGCAGGTCGGTGCCGACTACATGCTGACCGACAACGTGATGATCAACGCCCAGGTGCGTTACGTGGACATCGACACCACCGCC TACGTGAACAACAACGCGGTCGCCGGCGGCACCCGGGCCAAGGTCGACGTGGACGTCGATCCATGGGTCTACATGGTCGGCCTGGGCTACAAGTTCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATCGGCCAGACAAAAAAAGGCGCCTGCAAAGGCGCCTTTTTTCATCGCTGGGGGAAAGCTCAGAGGCCCAGCAAACGTGCCAGCCCGACGCTCATCGGGG TCGGCTCGGGGAACTTGAAGCGCTGCAACAGGCGCTGGTTGTTCGCCCGCGAATGGCGAATATCCCCCGAACGCGCCGGGCCGTAGCTGATCGGTGGCAA CTGCCCCACCACCTCGCCCAGGGCCTCGAGCAATTGCTTGAGGGTGGTGGCCTGGTTCAGGCCGACATTCACCGCGCCGACTTCCAGCTGCGGCATTTCC AGGGACTGCACCAGCACGTCCACCAGGTCTTCGACATACATGAAATCGCGGGTCTGCTCACCATCGCCGAATACGGTGATCGGCAGGCCTTTCTGCGCAC GCTCGCAAAAGATGCTGATGACCCCGGAGTACGGCGAGGACGGATCCTGGCGCGGCCCGAAGATGTTGAAGAAGCGGAAGATCGCCGGCTCCAGGCCATG
Amino Acid Sequence
>outer membrane protein W
MHKSLLSASLFALALAAPLAHAHEAGDIIVRAGAITVNPKADSGDVKVDRGPLAGANLGGKATMSSDTQLGLNFAYMLTNNIGIELLAATPFEHDVKLKG TALDAANGKLGTLKHLPPTLSVVYYPLDHKAAFQPYVGAGINYTWIYDEHVGSRASAAGFDNFRAKNSWGLAWQVGADYMLTDNVMINAQVRYVDIDTTA YVNNNAVAGGTRAKVDVDVDPWVYMVGLGYKF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site