Strain | Pseudomonas chlororaphis strain PA23, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CTGCCGCTGATCCTCAAGGAGAACGGCGACAGCTTCAACATCAAGGACCTGCTGCGTCCAGCGACCTTCGTGCCCGAGTCCAAGCGCCTGAACGTGCTGC TGCGCGAGTTCCGCGCCAACCACAACCACATGGCCATCGTCATCGACGAATACGGCGGCGTGGCGGGGCTGGTGACCATCGAGGACGTGCTGGAACAGAT CGTCGGCGACATCGAAGACGAGCACGACGTCGAGGAAGACAGCTACATCAAGCCCCTGCCGAGCGGCGATTTCCTGATCAAGGCGCTGACGCCGATCGAG AACTTCAACGAGTTCTTCGACAGCGAGTTCTCCGACGACGAGTTCGACACCGTCGGCGGCCTGGTGATGAGCGCGTTCGGGCACCTGCCTAAACGCAACG AAATCACCGAAATCGGTGCCTATCGCTTCCGTATCCTGAATGCCGACAGCCGTCGGATTCATCTGCTGCGACTAACGCCTATCCCCCGTTAAGGATCGAC
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DNA Sequence for Gene |
>EY04_RS27480
ATGCTGCGCTTAACCCGCCCCGGCTGGCCCGGTAACCTGCTGGCCATGGCGGCTGGCGCAATCACCACCCTGGCCCTGGCGCCATACGACATCTGGCCGC TGGCACTGCTGGCGGTCGGCTTCTTTTATGCCGGCCTGCGCGAGCTGAGCCCGCGTCAGGCGCTGTGGCGCGGCTGGTGTTTCGGCTTCGGCCTGTTTGC CGCCGGCACGAGCTGGATCTACGTCAGCATCCATACCTACGGTGGCGCCTCGGTGCTGCTGGCCAGTTTGCTGATGCTGGCCTTCATTGCCGCCATCGCC TTCTTTTTCGCCCTGCCGGCCTGGATCTGGGCGCGCTGGCTGCGGCGCAATGAGGCCCCCCTCGCCGACGCCCTGGCCTTCGCCGCCCTCTGGGTGGGCC AGGAAGCCTTCCGCGGCTGGTTCCTGACGGGCTTCCCCTGGCTCTACTCCGGCTACAGCCAGCTCGACGGCCCTCTGGCCGGCCTGGCCCCGCTGGGTGG CATGTGGCTGATCTCCTTTACCCTGGCGCTGACCGCCGCCCTGCTCTACAACCTGCCGGGCCTGATCCGCGCCGGACGCAAGGGGTTTATCGCCGCCGGC CTAGTGCTGCTGGTCGCCCCCTGGGTGATCGGCATCGCGCTCAAGGGACACGCCTGGACCAGCCCGTCGGGCGAGCCGCTGACCGTGGCGGCGATCCAGG GCAATATCGAACAGAGCCTGAAGTGGGACCCCGCACAGCTCAACTCCCAACTGGCGCTGTACCGCGACATGAGCTTCGGCTCCAAGCGCGTGGATCTGCT GGTGTGGCCGGAAACCGCGGTGCCGGTGCTCAAGGAGTCGGCCGAAGGTTATCTGAACATGATGGGCAACTTTGCCGCCGACCGGCATTCGGCGCTGATC ACCGGCGTACCGATCCGCCAGGAAGTGCACCACCAGAAACGCTACTTCAACGGCATTACCGTGGTCGGCGAAGGCGATGGCGAATACCTCAAGCAGAAGC TCGTGCCCTTCGGTGAGTATGTGCCCCTGCAAGACCTGCTGCGCGGCCTGATCGCGTTCTTCGACCTGCCCATGTCGGACTTCGCCCGCGGCCCTGCCGA CCAGCCTTTGCTGCAAGCCAAGGGCTACCAGATTGCGCCGTTCATCTGCTATGAGGTGGTGTATCCGGAATTCGCCGCCGGCCTGTCAGCCCGCAGCGAC CTGCTGCTGACCATCAGCAACGACACCTGGTTCGGCACTTCGATCGGCCCGTTGCAACACTTGCAGATGGCCCAGATGCGCGCCCTGGAAGCCGGCCGCT GGATGATCCGCGCTACCAACAACGGGGTGACCGGCCTGATCGACCCGTTCGGCAAGATCACCGTGCAGATTCCGCAGTTCGAACGCGGGATCCTGTACGG CGAAGTGGTGCCGATGCACAACCTGACGCCTTACCTGCAGTGGCGCTCCTGGCCACTGATCATCCTGAGCGTCCTGCTATTCGGCTGGGCCCTGCTGGCC AGCCGGATCGCCAAGACCGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCTCATCGCGAGCCTGCTCGCTCCTGCCGGGGATTTGCGATTCCCGAGGGAGCGAACTGGCTCGAGATGAACCTAGTCCTCTCCACGATAAAACAGCTTG TAGCCCACCAGCCCCACCGCCTCGTTCAGTAACTGGCCGCTCTGCCAGATCGACTTGAACTCCGGCATCCAGCCGCCCAGCGGCCTGGCGTTATCCACCC CGAGGAATCCCACGGGGGCCGGCACCACGGTGAATCCTGCCTGCTCGAAACTCCAGACAGCCCGCTGCATATGCCAGGCCTGGGTGACCAGCACTATGCG TTTGACACCTTGCGGCTCCAGCACTTGTGCGGTGAATTGGGCGTTTTCCCAGGTCGTGCGGCTACGCCCTTCCTGCCAGCGCACCTTCACGTCGAAATCG TTCAGCAACGACTCGGCCATCAGCGCCGCTTCCGTAGGCGGCGTGCCGTAGTGCAGGCCTCCGCTGGTCAGGATCGGCAACCCGGAAGCCTTGGCCAGGC
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Amino Acid Sequence |
>apolipoprotein N-acyltransferase
MLRLTRPGWPGNLLAMAAGAITTLALAPYDIWPLALLAVGFFYAGLRELSPRQALWRGWCFGFGLFAAGTSWIYVSIHTYGGASVLLASLLMLAFIAAIA FFFALPAWIWARWLRRNEAPLADALAFAALWVGQEAFRGWFLTGFPWLYSGYSQLDGPLAGLAPLGGMWLISFTLALTAALLYNLPGLIRAGRKGFIAAG LVLLVAPWVIGIALKGHAWTSPSGEPLTVAAIQGNIEQSLKWDPAQLNSQLALYRDMSFGSKRVDLLVWPETAVPVLKESAEGYLNMMGNFAADRHSALI TGVPIRQEVHHQKRYFNGITVVGEGDGEYLKQKLVPFGEYVPLQDLLRGLIAFFDLPMSDFARGPADQPLLQAKGYQIAPFICYEVVYPEFAAGLSARSD LLLTISNDTWFGTSIGPLQHLQMAQMRALEAGRWMIRATNNGVTGLIDPFGKITVQIPQFERGILYGEVVPMHNLTPYLQWRSWPLIILSVLLFGWALLA SRIAKTV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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