Pseudomonas chlororaphis PA23, EY04_RS24060
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis strain PA23, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGGCCCTGGCCAGCACCATCGGCGCCGGCAACCCGCTGACCAGCGGCGACACCCCGCTGCTGACCTGCGACGTCTGGGAACACGCTTACTACATCGACTA CCGCAACCTGCGTCCCAAGTACGTCGAAGCGTTCTGGAACCTGGTCAACTGGAAATTCGTGGCCGAGCAGTTCGAAGGCAAGACCTTCGTCGCCTAAGCC CGTTTGCAGTCAAAAAAACCCGGCATTGCCGGGTTTTTTCGTTTTACCGGCAAGCGGCCGGCTTGCCGCGCCAGCCCGGCGCGCTAACATCCGCTCAGGT AAAAAATCGCCGCCGTCCCTCAAGTTGCAAGGCTTGGCTACCGACATATAACCGATAAGCGCGGATAGGCTGGCTCCCGGCATTCCAGCCAAGCCTACAG GTGAAATATCCTGGGCCTGATTGTCCCTTTGACTGCCATCACGGGATTGCCAATACTCATGGCAACTTGACGCTACACGCACGGAACAAGGAATAACCCT
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| DNA Sequence for Gene |
>EY04_RS24060
TTGAAGCTGGAACTCAAAAACAGCTTGTCGGTGAAGTTGCTCCGGGTTGTGCTGCTGTCGGCACTGATAGTGGGCGTAGTTCTGAGCTGCGCACAAATCG TCTTCGATGCTTACAAGACTCGGCAGGCGGTCGCTAATGATGCCCAGCGCATTCTCGACATGTTTCGCGACCCCTCGACCCAGGCCGTTTACAGCCTGGA CCGCGAAATGGGCATGCAAGTCATCGAAGGCCTGTTCCAGGACGATGCCGTGCGCATGGCCTCCATTGGCCATCCCAACGAAACCATGCTCGCGGAAAAA ACCCGTGAGTTGCAGACATCTCCCAGCCGCTGGCTGACCGACCTGATCCTCGGCAAGGAGCGCACCTTCACCACCCAATTGGTGGGTCGTGGCCCCTACA GCGAATACTACGGCGACCTGAGCATCACCCTCGACACAGCCACCTACGGCCAGGGATTCATCGTCAGCTCGGTGATCATTTTCATTTCCGGCGTATTGCG CGCGTTGGCCATGGGCCTGGTGCTGTATCTGGTTTACCACTGGCTGCTGACCAAGCCGCTGTCACGGATCATCGAGCACCTGACCACCATCAATCCGGAC CGCCCCAGCGAACATCAGATTCCCTTGCTCAAGGGCCACGAGCGAAACGAGCTGGGGATCTGGATCAATACCGCCAACCAGTTGCTGGCGTCGATCGAGC GCAACACGCACCTGCGCCATGAAGCGGAAAACAGCCTGCTGCGCATGGCCCAGTACGACTTCCTCACTGGCCTGCCCAACCGCCAGCAGTTGCAGCAGCA ACTGGACAAGATCCTGATCGATGCTGGCCGCCTGCAACGCCGGGTCGCGGTGCTCTGTGTCGGCCTCGACGACTTCAAGGGCATCAACGAACAGTTCAGC TACCAGACCGGCGACCAGTTGCTGCTGGCCCTGGCCGATCGCCTGCGGGCCCACAGCGGTCGCCTGGGCGCCCTCGCCCGCCTCGGCGGCGACCAGTTCG CCCTGGTCCAGGCCGACATCGAACAACCCTACGAAGCCGCCGAACTGGCGCAGAGCATTCTCGACGACCTGGAAGCGCCGTTCGCCCTCGACCATCAGGA AATCCGTCTGCGCGCCACCATCGGCATCACCCTGTTCCCGGAAGACGGCGACAGCACCGAAAAGCTGCTGCAGAAAGCCGAACAGACCATGACCCTGGCC AAGAGCCGGTCGCGCAACCGTTATCAGTTCTACATCGCCAGCGTCGACAGCGAGATGCGCCGGCGCCGCGAACTGGAGAAGGACCTGCGCGAAGCCCTGA CCCGCCAGCAGTTCCACCTGGTCTACCAGCCGCAGATCAGCTACCGCGATCATCGGGTGGTCGGGGTCGAGGCGCTGCTGCGCTGGCAGCATCCGGAACA CGGCTTCGTCCCGCCGGACCTGTTCATCCCCCTGGCCGAGCAGAACGGCACCATCATCGCCATCGGCGAATGGGTGCTGGACCAGGCCTGCCGCCAGTTG CGCGAATGGCATGACCTGGGCTTCAGCGACCTGCGCATGGCGGTCAACCTGTCTACCGTGCAACTGCACCACGCCGAGCTGCCGCGGGTGGTCAACAACC TGCTGCAGATCTACCGCCTGCCGCCGCGCAGCCTGGAGCTGGAAGTCACCGAAACCGGCCTGATGGAAGACATCAGCACCGCCGCCCAGCACCTGCTGAG CCTGCGCCGCTCGGGTGCGCTGATCGCCATCGACGACTTCGGCACCGGCTATTCGTCCCTGAGCTATCTCAAGAGCCTGCCGCTGGACAAGATCAAGATC GACAAGAGCTTCGTCCAGGACCTGCTGGATGATGACGACGATGCCACCATCGTGCGGGCGATCATCCAGCTGGGCAAAAGCCTGGGCATGCAGGTGATCG CCGAGGGAGTGGAAACCGCCGAGCAGGAGGCCTACATCATCTCCGAAGGCTGCCACGAAGGTCAGGGTTATCACTACAGCAAACCCCTGCCGGCACGGGA GCTGAGCGCCTACCTGAAACAGGCCCAGCGCAGTAACGCGGCCATCCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAGCACGATTGCGCGCCTAAGCCTGATCCAGCGCAATCGCTTCCTGAATAGGAAATATTTACAACCACAACCCTTTACACATAATGCAAATCTTTCGCAT TATGTCGCAGTTTTGCGCGCCCCTCGCGCCAGTCCACCCCTCTCTCGAAGCAGGATGTTCGCCATGATTCGTATGCCTCTGGCTACCGCCAGTCTGTTGG CCATCGCTATTTCCCTCGCCGGTTGCGGCGAAGGCAAAGACAAGGCTGCCGCGCCGCAAGCCGCTGCTCCAGCCGCCAGCACCGCAGCCCCGGCCACCGC TCCTGCGGCCGGCAAGGTCGATGAAGCGGCGGCCAAGGCGGTTGTCGCGCATTACGCCGACATGGTCTTCGCCGTATACAGCGATGCCGAATCCACCGCG AAGACCCTGCAGACCGCAATCGACGCCTTCCTCGCCAAACCCAACGCCGACACCCTGAAAGCCGCCAAGGCTGCCTGGGTCGCCGCTCGCGTGCCTTACC
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| Amino Acid Sequence |
>diguanylate cyclase
MKLELKNSLSVKLLRVVLLSALIVGVVLSCAQIVFDAYKTRQAVANDAQRILDMFRDPSTQAVYSLDREMGMQVIEGLFQDDAVRMASIGHPNETMLAEK TRELQTSPSRWLTDLILGKERTFTTQLVGRGPYSEYYGDLSITLDTATYGQGFIVSSVIIFISGVLRALAMGLVLYLVYHWLLTKPLSRIIEHLTTINPD RPSEHQIPLLKGHERNELGIWINTANQLLASIERNTHLRHEAENSLLRMAQYDFLTGLPNRQQLQQQLDKILIDAGRLQRRVAVLCVGLDDFKGINEQFS YQTGDQLLLALADRLRAHSGRLGALARLGGDQFALVQADIEQPYEAAELAQSILDDLEAPFALDHQEIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLA KSRSRNRYQFYIASVDSEMRRRRELEKDLREALTRQQFHLVYQPQISYRDHRVVGVEALLRWQHPEHGFVPPDLFIPLAEQNGTIIAIGEWVLDQACRQL REWHDLGFSDLRMAVNLSTVQLHHAELPRVVNNLLQIYRLPPRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKI DKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQEAYIISEGCHEGQGYHYSKPLPARELSAYLKQAQRSNAAIL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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