Pseudomonas chlororaphis PA23, EY04_RS23045
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0005515 | protein binding |
Inferred from Sequence Model
Term mapped from: InterPro:SM00028
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 217 | 240 | - |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 133 | 166 | 12.0 |
| SUPERFAMILY | SSF48452 | TPR-like | IPR011990 | Tetratricopeptide-like helical domain superfamily | 84 | 190 | 8.85E-14 |
| Pfam | PF14559 | Tetratricopeptide repeat | - | - | 113 | 168 | 9.3E-8 |
| PIRSF | PIRSF029658 | UCP029658_TPR | IPR016931 | Uncharacterised conserved protein UCP029658, TPR | 1 | 239 | 6.7E-75 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | IPR011990 | Tetratricopeptide-like helical domain superfamily | 36 | 229 | 7.6E-18 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 213 | 240 | - |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 99 | 132 | 13.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.