Pseudomonas chlororaphis PA23, EY04_RS22535
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0006629 | lipid metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.20.20.190
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0008081 | phosphoric diester hydrolase activity |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.20.20.190
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pch00564 | Glycerophospholipid metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | IPR017946 | PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily | 31 | 361 | 1.1E-71 |
| CDD | cd08601 | GDPD_SaGlpQ_like | - | - | 40 | 359 | 6.33829E-112 |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | IPR030395 | Glycerophosphodiester phosphodiesterase domain | 45 | 350 | 1.2E-37 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | IPR017946 | PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily | 38 | 357 | 8.89E-61 |
| PANTHER | PTHR46211 | GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE | - | - | 31 | 359 | 6.2E-52 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.