Pseudomonas chlororaphis PA23, EY04_RS21445

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain PA23, complete genome. [Details]
DNA Sequence Upstream of Gene
GCCTGGCGATCGCGCGGATGGTCCTGGCCGAGCCCAAGGTGGTGATCCTCGACGAAGCCACCTCCGCCCTGGACGCCGCCACCGAGTACAACCTGCACCA GGCGCTGACCCGTTTCCTGCATGGCCGGACCACCCTGATCATTGCCCACCGCCTGTCCGCGGTAAAACAGGCGGATCGGGTTCTGGTGTTCGATGGCGGA CAGATTGCCGAAGATGGCGACCATCAGCAGCTAATTGCCGACGGCGGCCTTTACGCCAAGCTTTACGGGCATTTGCAGCAAGTCCAACGACCTTGAGTTT TATCCGGTTTTCTGTGCTTAGTGCTTGAATTCTCTGGTGGAAATGACCCTCCTGGGGCACGGCCCTGTCGTGTCTCGACTGGCAGCGTGCTCGAACGTCA CGGCCTGTGCGTTCGAAGCCGCGGAAATTAGCCTAGTCTGTGCTGTCAGGAGCGTTATTTTCTCGGGTGTTCATCTGGCAGTGCTTATGCAAGGGACCTC
DNA Sequence for Gene
>EY04_RS21445
ATGAAGCAAAAGCGGACTCTCGGAACGCCACGGTTATTGGGCATCGTCTGGCCATTTATTGCGGTGGTGTTGTTTCAAGCGCTGTTGGGTGGCCTCAGCT TATATGTCCTTTCGGCGGTACGTGGTTACGTTGCCGGGGAGAGCCTTTGGTCCAAGGGCCAGAAGGACGCCATCTACTACCTCAATCTCTACGCCGACAG CCGCGACGAATCGATCTTCCTGAAGTACCAGAACGCCATTGCCGTGCCCCAGGGCGGGCATGAGCTGCGGGTCGCGCTGGATCAGCAACCGCCCGACCTG AATGCCGCGCGGGCGGGGATTCTCAAGGGCGGCAACCACCCCGACGACAGCGACAGCGTGATCTGGCTGTACCTGAACTTCCGCCATTTCAGCTACCTGG AAAAAGCCATCGACCTGTGGACCGTGGGCGACAGTTATCTGGTGCAGCTCGATAGCGTGGCCCATGAAATGCACCGCAGCATTACCAGCAACCAGGCCTC CGAAGCCGATATCCAGCGCTGGAAGAACCAGATTTTCGCCATCAACGATGGCGTGACGCCGGCAGCCAAGGCCTTTAGCGATGCACTGGGCGAGGGCTCG CGGGTCATCCTGCGGCTGTTGCTGATCACCAACCTGGCTACCGCGCTGGGGCTGATTGTCCTGGCGTTGCTGCGCACCCATAAGCTGCTGGCCCAGCGTC ATGAATTCGCCAGCGCCTTGCAGCTGGAAAAGGAGCGGGCGCAGATCACCCTGCAATCCATTGGCGACGGCGTCATCACCACCGACGTGGACGGCGCCAT CGCCTACATGAACCCGGCCGCCGAGGAAATGACCCACTGGAAGGCCGAGCAGGCCGTGGGGCTGCCGCTGGCGGCCTTGTTCAATCTGCTCGATGAAAAT GCCCAGACCGACGGCTTCACCCTGATCGAACATATCCTCAGCGGCCAGCTCAGTGGCGGTAGCGAGCACTCGAAGCTGATCCAGCGCCTGGATGGCAGTA CGGTGTCGGTGACCCTGGTCGGCGCGCCTATCCAGAACGCCGGCAAGGTCAGCGGCACGGTGCTGGTGCTGCACGACATGACCCAGGAACGCCAGTACAT CGCCAATCTGTCCTGGCAGGCGACCCACGATGCCTTGACCGGCCTGGCGAACCGCCGCGAGTTCGAATACCGCCTGGAGCAGGCGCTGCACAACCTGAGC CGGCAGTCGGGGCGGCATGCGCTGATGTTTCTCGACCTGGACCAGTTCAAGCTGGTCAACGACACCTGCGGCCATGCGGCAGGGGACGAGTTGCTCCGGC ATATCTGCGCCTTGCTCCAGTCGGGCCTGCGCGAGGGCGATACCCTGGCGCGCCTGGGTGGCGACGAATTCGGCATCCTGCTGGAAAACTGCTCGCCGGA AGCGGCGGAAAAGATCGCCGAAGGCCTGCGCCAGACGGTGCAGAACCTGCATTTTGTCTGGAAGGGCCGGCCCTTCGTGACCACGGTCAGTATCGGCCTG GTGCACGTGGCGCACACCCCGACCACCCTCGAAGCATCGCTGCGGGCAGCGGACATGGCGTGCTACATGGCCAAGGAGAAAGGGCGCAACCGGGTCCAGG TCTATCACGCGGACGACTCGGAGCTGTCCCTGCGGTTCGGTGAAATGGCCTGGGTCCAGCGCCTGCACATGGCCCTGGAGGAAAACCGCTTCTGTCTTTA TGCCCAGGAAATAGCCGCCCTGGGGCATGTGGACCGGCTTGGCGGGCATATCGAGATTCTGCTGCGCCTGCACGACGAGGCCGGGCGGATGATCCTGCCC GACAGCTTCATTCCGGCCGCCGAGCGTTACGGCCTGATGACATCTCTGGACCGTTGGGTAGTGGAGAATGTGTTCAAGATCATCGCCGAATGCATCCGCG AGGAGCGTGAAGGGCCGCTGGCGATGTGTGCGATCAATCTCTCGGGCGCGACCATCGGTGACGAGGCTTTCCTGGACTTCCTGCGCGAGCAGTTCATTGT CCATGGTGTGCCGCCGGACCTGATTTGTTTTGAAATCACCGAGACCAGCGCTATCTCCAATCTCGGCAGTGCGATTCGATTTATCAACGAGCTCAAGGGC TTGGGCTGCCATTTTTCGTTGGACGACTTTTGCGCGGGAATGTCGTCATTCGCTTATCTCAAACATTTGCCTGTAGACTTCCTGAAGATCGATGGAAGTT TCGTAAAGGATATGCTGGACGACCCGATCAATCGCGCGATGGTCGAGGTGATCAACCATATCGGTCATGTGATGGGCAAACGCACGATTGCCGAGTTTGT CGAAACACCGCAGATTGAGCAGGCATTGTTGGAGATCGGCGTGGATTACGCTCAGGGCTACCTGATCGAGCGCCCGCAACTCTTTACCTGCGACAGCCTG CAGTGCCGGCCTTCACGACCACAGCCTCTGCTATTCAAGGCTCCTGGCACGTTCCGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATCTCTCGCTGATCCGTACCATCACCATCAAAAGGAGCCCCGACAGTGATCGACGCATTCAACAGGACCGGTCCGCTCATGGACGCTGCAAGCTATCCGG CCTGGGCCCAGCAGCTGATCCAGGATTGCAGCGAGAGCAAGCGCCGCGTGGTCGACCATGAACTGTACCAGCGCATGCGTGACAACAAGCTCAGCAACAA GACCATGCGCCAGTACCTGATCGGTGGCTGGCCGGTTGTCGAGCAGTTCGCCCTGTACATGGCGCAGAACCTGACCAAGACCCGTTTTGCCCGTCACCCC GGTGAAGACATGGCGCGGCGCTGGCTGATGCGCAATATCCGGGTCGAGCTCAATCATGCCGATTACTGGGTGAACTGGAGTCGCGCCCACGGCGTGAGCC TGGAAGATCTGCAGGAGCAGCAGGTCCCTCCGGAGCTGCATGCCTTGAGTCATTGGTGCTGGCACACCAGCTCCGCCGATTCGCTGATCGTGGCGATCGC
Amino Acid Sequence
>membrane protein
MKQKRTLGTPRLLGIVWPFIAVVLFQALLGGLSLYVLSAVRGYVAGESLWSKGQKDAIYYLNLYADSRDESIFLKYQNAIAVPQGGHELRVALDQQPPDL NAARAGILKGGNHPDDSDSVIWLYLNFRHFSYLEKAIDLWTVGDSYLVQLDSVAHEMHRSITSNQASEADIQRWKNQIFAINDGVTPAAKAFSDALGEGS RVILRLLLITNLATALGLIVLALLRTHKLLAQRHEFASALQLEKERAQITLQSIGDGVITTDVDGAIAYMNPAAEEMTHWKAEQAVGLPLAALFNLLDEN AQTDGFTLIEHILSGQLSGGSEHSKLIQRLDGSTVSVTLVGAPIQNAGKVSGTVLVLHDMTQERQYIANLSWQATHDALTGLANRREFEYRLEQALHNLS RQSGRHALMFLDLDQFKLVNDTCGHAAGDELLRHICALLQSGLREGDTLARLGGDEFGILLENCSPEAAEKIAEGLRQTVQNLHFVWKGRPFVTTVSIGL VHVAHTPTTLEASLRAADMACYMAKEKGRNRVQVYHADDSELSLRFGEMAWVQRLHMALEENRFCLYAQEIAALGHVDRLGGHIEILLRLHDEAGRMILP DSFIPAAERYGLMTSLDRWVVENVFKIIAECIREEREGPLAMCAINLSGATIGDEAFLDFLREQFIVHGVPPDLICFEITETSAISNLGSAIRFINELKG LGCHFSLDDFCAGMSSFAYLKHLPVDFLKIDGSFVKDMLDDPINRAMVEVINHIGHVMGKRTIAEFVETPQIEQALLEIGVDYAQGYLIERPQLFTCDSL QCRPSRPQPLLFKAPGTFR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site