Pseudomonas chlororaphis PA23, EY04_RS20915
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis strain PA23, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGGGTCTCGCGGGCGCGCAGCAGGCTGTCGTGAATCTGTGTGCGCAATTCGTCCGCCTGTTCGCCCGCCAGGGTGGCGGTGTGTTCCAGCAGGCGTTCCG TGTCACTGACCAGTGCCTGAAAGTCCGCCATCAGGGTTTCTTGAGCTGTCTTGGTGGTTTTGCTGGCCATGATGATCTCCATAGTGGCGTTCTGAAGGGT TCGAGTATGAGCCTTGCGCGAAGGTTCAGTGCAATTGTCTGGTACAGCTTTTGCTTTGTCCTGGTGCGTAAACACGGGTGGTTGCGCCGAAAGCGCGCAG GATGCGGTGCCTGGCAGCTAAAACCTTACCCTAAAAAATCAACACTTATGGAAACACCCCCGAGCGATACACCTCTCTCGAAAAAGCGTCGCGCCAAAAT GGGTCGCAATACGTAGGTCGACAGGACCTTAGGTGCCAAGTTGGTGCAAAAACGCTCGAGCGGCTCGCGGATAATTCCTGCTATCAGGTCTGCCCATTCC
|
|
| DNA Sequence for Gene |
>EY04_RS20915
ATGGAAAATCTGCAAAGCGCTGTGGACACTCTGGTCCATGGTTCCAATACCCTGTTTATCCTCATCGGTGCGGTCATGGTCCTGGCCATGCATGCCGGCT TCGCCTTTCTCGAGGTGGGCACGGTGCGCCAGAAAAACCAGGTCAACGCCTTGTCGAAGATCCTCAGCGACTTCGCGGTCTCGACCCTGGCCTATTTCTT TATAGGCTATTGGATCTCCTACGGCGTCAGCTTCCTGCAACCGGCGGCGGTGATCAGCGCCGATCACGGCTACGGGCTGGTGAAGTTCTTCTTCCTGCTG ACGTTCGCCGCGGCCATTCCGGCGATCATTTCCGGCGGCATCGCCGAGCGTGCGCGGTTCGTCCCGCAGCTCTGCGCCACGGCGCTGATCGTGGCCTTCA TCTATCCCTTCTTAGAAGGCCTGGTGTGGAACGGCAACTACGGCCTGCAAGCCTGGCTGCAGGAGAGCTTCGGCGCAGGCTTCCATGATTTCGCCGGCTC GGTGGTGGTGCATGCCATGGGCGGCTGGCTGGCGCTGGCCGCGGTGCTGTTGCTCGGGCCGCGCAACGGGCGCTACCGCGACGGCAAGCTGGTGGCGTTC GCGCCGTCGAGCATTCCGTTCCTGGCCTTGGGTTCGTGGATCCTGATTGTCGGCTGGTTCGGCTTCAACGTGATGAGCGCGCAGACCCTGCAGGCGGTCA GCGGGCTGGTGGCGGTGAACTCGCTGATGGCCATGGTCGGCGGCACGGTGGCGGCGTTGATCGTCGGGCGCAACGACCCGGGCTTTTTGCACAACGGCCC GCTGGCCGGGCTGGTGGCGATCTGCGCCGGCTCCGACCTGATGCACCCGGTGGGAGCGTTGATCACCGGGGCGATCGCCGGCGCGCTGTTCGTCTGGTGC TTTATCGCCACCCAGACGCGCTGGAAGATCGACGATGTGCTGGGTGTCTGGCCATTGCATGGTGTGTGCGGTGTGTGGGGCGGTATTGCCTGTGGGGTCT TCGGCCAGAGCGCCCTGGGTGGCCTGGGCGGTGTCAGCCTGACCAGCCAGTTGATCGGTACCGGCCTGGGCGTGCTGGTGGCGCTGGTCGGCGGCTTCCT GGTGTATGGCGCGATCAAGGCGCTCTGCGGCCTGCGCCTGACCCAGGAGCAGGAGTACTACGGCGCCGACCTGTCGCTGCACAAGATCGGCGCGGTCAGC CAGGACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AGCCTTGCGGCCCGGGCTGGAGCCTCCAGCCTGGGCTGCTTGCCGCTGATCATTGGCCGCCGAGCAGGCGCGCCTCCGACGCTTCGATGGCCGCCAGCGG GCCGGACATCAACACCGTATCGCCGGCTTGCAGCAAGGTGCCGGCGGTCAGCTCCAGGTCACGGCCATCGCGCTGCACGCCTTGCACATCCACACCCAAC TGTTCCAGGGCCAGCTCGCCCAGGGCCAGGTCGCAGGCGTGGGCCGCGCTGCCGAGATTGACCGCATGCATCAGCACCCGTGGCTGGCCGCGGTTGTCCA GCAGGTCGGTCTGCGCGCCATGGTAGAAGCCGTGCAGCAGGCTATAGCGGTTGTGGCGGACTTCATCGACCTTGGCCTGTACCTGGTGTTCCGGCAGCCC GAGCATCACCAGCGCATGGGACGCCAGCATCAGGCTCGACTCCAGCAGCTCCGGCACCACTTCGCTGGCGCCGGCGGCTTTCAGTTCGGCCAGTTGGCTG
|
|
| Amino Acid Sequence |
>ammonium transporter
MENLQSAVDTLVHGSNTLFILIGAVMVLAMHAGFAFLEVGTVRQKNQVNALSKILSDFAVSTLAYFFIGYWISYGVSFLQPAAVISADHGYGLVKFFFLL TFAAAIPAIISGGIAERARFVPQLCATALIVAFIYPFLEGLVWNGNYGLQAWLQESFGAGFHDFAGSVVVHAMGGWLALAAVLLLGPRNGRYRDGKLVAF APSSIPFLALGSWILIVGWFGFNVMSAQTLQAVSGLVAVNSLMAMVGGTVAALIVGRNDPGFLHNGPLAGLVAICAGSDLMHPVGALITGAIAGALFVWC FIATQTRWKIDDVLGVWPLHGVCGVWGGIACGVFGQSALGGLGGVSLTSQLIGTGLGVLVALVGGFLVYGAIKALCGLRLTQEQEYYGADLSLHKIGAVS QD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|