Pseudomonas chlororaphis PA23, EY04_RS18880
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis strain PA23, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCCAGGCGGCATGCGCATGTCGATGAAGGCCATGGCGTAGGGCGCATTGCGTTCCAGCGCCGCTTGCACCATGTTCAGCGCCTCCCGGCCCTGGAATG CCGAGTCGAGGAAAAAGTGCTCCAGCGCGGCACTCACGGGCGTACCGAACAGGGCGGCCTCGGCGTCGCTGAGGCCGTCTTCGGGGGCATCCGTGGCGGC GAGGATCTTGCGAAAATCCTCGTGGATCGACGCCGTGTCGTCGACGATCAGAATTCGCCGGTTGGTCCGGTCTGCCGACGCCATCATCGTCGTGCTCCAA CCCAGCGCGGGGACCTTATAGATAGGCTCATCGGGCTTCCCTTCCTGCTTCCTGGACATGCAATCCATTTTCGCCTTGAGCATAGTCAGGCTCCCCTGTA TGCGCTAATCGGCCGGCGTCAAATCCATGCCGAAACGCTACAAGTCATCTAGCCTGTCCCAGAAGGCAGGTCTGATCGAAGTCAAAGGGGAGGGGGAGAC
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| DNA Sequence for Gene |
>EY04_RS18880
ATGGAAGAACATACAGCGGGCGCAGCCCAGGACAGATCGACGGTACTGCTGGTCGACGATGAGGAATCGATTCTCAATAGCCTTCGCCGGCTGTTACGCA GCCAGCCTTACGACATCCTGCTGGCCGACAGCGGTACCAAGGCCCTGGAAATCCTCGAGCAGCGGCCGGTCGACGTGGTCATGAGCGACGCCCGAATGCC GGGCATGGACGGCGCGACCTTGCTGGCCCATATCCATCAGCGTTATCCATCGACGCTGCGCATCCTGCTCACCGGTTATGCCGACATGACGTTGATCGCC AAGGCCATCAACGAAGGGCAGATCCATCGCTATATCAGCAAGCCCTGGAACGACGAGGACATGCTGGTGACGCTGCGCCAGGCCCTGGCCCATCACCATT CCGAAAGCGAGCGCCTGCGTCTGGAAGCGCTGACCCGGCAGCAGAACGAGCAACTGAAGAGCCTCAACTCGACCCTGGAAAAGCGCGTTGCGGCGCGCAC CGCCGAGCTGCAACAGACCGCCGACATGCTCGACCTGGCCTATGAAGAGCTCAAGCGCAGCTACGTGACCGGCACCGAGGTGTTTTCGCTGCTGGCGAAC CTGCGCTTGCCCAAGGCCAAGCAGACCAACCGGCAGATCATCGAACTGATTCGCGTCTACTGCATCACCCATGGCCTGGATGAAAGCGAAAGCCGCGACA TGACCATGGCCGCCGCGTTGTACAACATCGGCAAGCTGAGCTGGACCGACAGCATGATGACCGCGCCAGCGGATCTGCTGCACCACACCGAGCGCGACCT GTACCGCGCCTACCCGAAACAGAGCGAATCGCTGCTGATGACCCTGGAGCCGATGAAGGACGCGGCGCGCATCATCCTGCATCACCAGGAGCGCTGGGAT GGCAGTGGTTTTCCCGATCATCTCAAGGGCGAGGCGATTCCGCTGGGCTCGCGCTGGCTCAAGCTGGCCGTGGACTTCATCGAGTTGCAGCGTGGGCTGA TCCTCGAACGGCAGATGAACAGCGATGAGGCGCTGCTGTTCATTCGCAAATACGCCGGCAAACTCTACGATCCGGACCTGGTGGAGGACTTCGTCGGCGT CTGCGCGGCCTATCAGAACGATGTCACCCTGGCCGATCCGACGGTCAGGGTCCTGACCACCCGGGACCTGGCTGCCGGCATGACCCTGGCGCGCAACCTG AATGCCGACAACGGCATGCTGCTGCTCAATGCCGGCAAGGTGCTGAGCGGCCCGCTGGTGGACAAGCTCATCGCTTTCGAAGCGATGGAAGGGGCCAAAT ACAGCATCTTCGTCAAAATACCCGAAGAGCCGGAAACGGCGGCCTTAGCCGCCGGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGACGAACGGATTAACCGCCGCTGGCGGCGACAATGCTGGCCACCTGGCGTGGCTGGCAGTTGAGATAGGGCGAGGATTTCAGCCATTGCTGGTCGGGG TACCAGGAAAACATGAACTGACCGTCCTTGAGGCGGTCGATCACCTGGCGTGCCACCTGTGGCCGCACGGCCGGGCAACCCAGGCTGCGGCCGATGCGCC CTTGGCGTCGGCTCCACAGGGGGCTCACGTAGTCGGCCGCGTGAATCACAATGTCCCGATCGCGGGCGAGATCGTTGAAGCCTGGTTCCAGGCCGTCCAT GCGCAGCGAATAACCGTGGCTGCCTTCATAACTTTCCTGGGTACGAAACAGGCCGAGGCTGGACTGGAAGCTGCCCATGCGATTGGAAAACTGGGTGGCG AAGTTTTCCCCGGATTTCTGCCCGTGGGCGACCAGGTCGCGCAGCACCAGGGTTCTTTTATTCAAATCGAAGATCCACAGGCGGCGGGCGGTGGAAGGTT
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| Amino Acid Sequence |
>chemotaxis protein CheY
MEEHTAGAAQDRSTVLLVDDEESILNSLRRLLRSQPYDILLADSGTKALEILEQRPVDVVMSDARMPGMDGATLLAHIHQRYPSTLRILLTGYADMTLIA KAINEGQIHRYISKPWNDEDMLVTLRQALAHHHSESERLRLEALTRQQNEQLKSLNSTLEKRVAARTAELQQTADMLDLAYEELKRSYVTGTEVFSLLAN LRLPKAKQTNRQIIELIRVYCITHGLDESESRDMTMAAALYNIGKLSWTDSMMTAPADLLHHTERDLYRAYPKQSESLLMTLEPMKDAARIILHHQERWD GSGFPDHLKGEAIPLGSRWLKLAVDFIELQRGLILERQMNSDEALLFIRKYAGKLYDPDLVEDFVGVCAAYQNDVTLADPTVRVLTTRDLAAGMTLARNL NADNGMLLLNAGKVLSGPLVDKLIAFEAMEGAKYSIFVKIPEEPETAALAAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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