Strain | Pseudomonas chlororaphis strain PA23, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GAACGAGGCCCATGGCACGCTGTTGACCATAGAGCGCGAGGTCAACGAACGGGTCGGTTCCAACCACGGCGCGGACCTGGGCACGATCAAGCAACTGCTT CGGCATGCCGTGCAAATCATCGCCGAGCACGCCCCTCAGCCGGGCGTTTCCAGCGCTGTCGCGCAAGCCGGCGAGCCTGTCGATGCAGCCACGTCCACGG CCCCCAGCGCCGCCGCGCCGCGCATCGCGGGCGAGATCGGCAACCGTGACGATGTGCTGCGCAGCCTCGACCGGATCCTCGGTTACTACGTCAGGCACGA GCCCTCAAGCCCGGTGCCCGTGCTCTTGAGCCGCGCCAAGAGCCTGGTCAGCGCGGATTTCGCCACCATCGTGAGCAACCTGATTCCGGACGGTTTTTCC CAGTTCGAAAAATTGCGCGGGCCCGAAGGTGAACAGTCCGAGTGAAAACGCTTAACCGACGCCCATCCAACACAGCCGCCTAGGCAGCGCAGGAGGAAAA
|
|
DNA Sequence for Gene |
>EY04_RS17865
ATGGCTAACACCAGCAGCCAGAAATTCATCGCCCGTAACCGTGCTCCCCGGGTGCAGATCGAGTACGACGTGGAGCTTTACGGTGCGGAGAAGAAGGTGC AATTGCCCTTCGTCATGGGGGTGATGGCCGACCTTGTCGGCAAGCCCGCCGAACCGCTGCCGGCGGTGGCCGACCGCAAGTTCCTGGAGATCGACGTCGA CAACTTCGACTCGCGGCTCAAGGCGATGAAACCGCGGGTGGCGTTCAACGTGCCCAATGCCCTGACCGGCGAAGGCAACCTGAGCCTGGACATCACGTTC GAGAGCATGGACGACTTCAGCCCGGCCGCGGTGGCGCGCAAGGTCGATGCCCTCAACCAACTGCTCGAAGCCCGCACCCAGCTGGCCAATCTGCTGACCT ACATGGACGGCAAGACCGGTGCCGAGGACATGATCATGAAGGCGATCAAGGACCCGGCGCTGTTGCAGGCATTGGCCAGTGCGCCGAAACCGACCGAACC CGAGCCGCAAGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CAGAGGACGCAGACCATGGCCGAATTGATGAAAGACCCGCAGGCCCAGGCAGACGCCGCGATCGAACAACCGAGCGACTTCGCCGCCCTGCTCCTGCAAG AGTTCAAACCCAAGACCGAGCACGCCCGCGAGGCGGTGGAAAGCGCCGTGCGCACCCTGGCCGAACAGGCCCTGAGCAAGACCGAGCTGATCTCCAACGA CGCGATCAAATCCATCGAATCGATCATCGCCGCAATCGACGCCAAGCTCACCGCGCAGGTCAACCTGATCATGCATCACGCCGACTTCCAGCAACTGGAA AGCGCCTGGCGCGGCCTGAACTACCTGGTCAACAACACGGAAACCGACGAGCAGCTGAAGATCCGCGTGATGAGCATCGCCAAGGGCGACCTGCACAAGA CCCTGAAGAAGTTCAAGGGCACCGCCTGGGACCAGAGTCCGATCTTCAAGAAAATGTACGAAGAGGAATACGGCCAGTTCGGCGGCGAGCCGTTCGGCTG
|
|
Amino Acid Sequence |
>hypothetical protein
MANTSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMADLVGKPAEPLPAVADRKFLEIDVDNFDSRLKAMKPRVAFNVPNALTGEGNLSLDITF ESMDDFSPAAVARKVDALNQLLEARTQLANLLTYMDGKTGAEDMIMKAIKDPALLQALASAPKPTEPEPQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|