Pseudomonas chlororaphis PA23, EY04_RS17430

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain PA23, complete genome. [Details]
DNA Sequence Upstream of Gene
CCAGCCCGGCGGTGGCGAGGTGGCGGTGCTGGAAAAGGCGGTGGAGGTCAGTGTGCCGGGCAGCGGTTCGGCGATGCGCGTCGAGGCCGGCAAGCGGGTG GCGTTCAACGAGCGCAGCCTGGGTATGCAACGCGGCAACGATGTCTCGGTGGGCGCCTGGCAGCAGGGCAGCATCATCGCCATCGACCGTCCCTTGGCTG TGCTGCTCAACGACCTGTCGCGCTATCGTCCCGGCGTGCTGCGTTGGGACCCGGCCATCGGCGACCTGAAGGTCTCCGGGGTCTTTCCCATCGATGACAC CGACCTCGCGCTGGCGGCGCTGGAGAGCGGATTTGCCCTGCGCGTGACCCGCTACAGCCGTTTCTGGGTCCAGGTCGCCCGGGCTGATTCGCGCTGACGT CAGGTCTTGGATAAAAAATTCTCCGGCGCCTGCACTTTTCGGCCGCACCGTTCGGCTCATCCCTCAGTGAGTTGTCATTGACCGTTTTGGGGGAGGGAGC
DNA Sequence for Gene
>EY04_RS17430
ATGTCTCGGGTGAACGCGCCAGGTCGTCTGGCGAATGCAGTGAAAGTCGCGTTGTTGGCAACCAGCATGGCCAGCGCCTGCTCGGCGAATGCCGACCCGG CCGCAGGGGCCGCGGCGCAGCAGAGCCAGGTCCGCGCCTATGACATCGGCGCCGGCAGCCTGGTGGATGTGCTGACCCGTTTTTCCAGCGCCGCCGGGGC GGCGATTTCCTTTGATGCGCGCCAGACCCAGGGCCGGCAATCGCCCGGGCTCAAGGGCCAGTTCGGGGTCGACGAAGGTTTCGCGCGGATTCTGCGCGGC AGTGGCCTGCGCGCCGAGCCCCAGGCCAACGGCAGCTATGTGCTGCGCGCGGTGCCGGTGCTCGGCTCGGCGCTGGAACTGGGCGCCACCAACATCAACG GCCAGCTGCTGGGCGCGACCACCGAGGGCAGCGGTTCCTACACCACCGGGGCGGTGACCATCGGCAAGGGCGAGCACTCGCTGCGGGAAACCCCGCAATC GGTGACGGTGATGACCCGCAAGATGCTCGACGACCAGAACCTGCACAGCATCGACCAGGTCATGGAAAAGACCCCGGGCATCACCGTCTACGACTCGACC ATGGGCGGCAAGTATTTCTACTCCCGCGGCTTTCGCATGTCGGGCCAGTATCAGTACGACGGCGTGCCGCTGGACATGGGCAACCAGTATGTCCAGGCCG ACAGCTTCAGCGGCGACATGGCCTATTACGACCGGGTGGAAATCCTCCGCGGCGCGGCGGGGATGATGAAGGGCGCGGGCGGCACCGCCGGCGGGGTGAA CTTCGTGCGCAAGCGTGGCCAGGGCACCCCGCAGACCGAGGTCACGCTGTCCGGCGGCAGCTGGGACAACTACCGCGGGCAGGTCGACACCGGCGGTCCG CTCAACGAGTCCGGCACCCTGCGTGGCCGCGCGGTGGTGGCCGAGCAGAGCCGGCATTACTTCATCGACGACGCCAGTCGCAAGGACCAGGTGTATTACG GCGCGCTCGACTTCGACCTGAGCCCCGACACGACCCTCGGCCTGGGCATCGCCTATGAAGACGTCGACGCCAACCCGTGCTGGGGCGGCCTGCCGCGCTA CAAGGACGGCAGCGACCTGAAGCTCGGCCGCTCGACCTGCCTCGACCCGTCCTGGAACACCTGGCGCAGCAAGCGCACCACGGTGTTCGGCGACCTCAGG CACCAGCTCAACGACGACTGGGCGCTGAAGGTCGCCGGCGTCTATACCAAGAACACCCAGGACATCAAATATGCCTTCGCTTCCGGCGCGGTGACGCCCG GCATCGACACCACCGGCATGCTCGGCAGCATGTACGACTACGACCAGGTCGATTACGGCCTCGATGCCTACCTGGACGGCAAGTTCAACGCGTTCGGCCT GCAGCATGAGCTGGTGGTGGGGGTCAACGGCAGCCGTGCGGACAAGGACGATTTCTTCTCGGTGGCCTTCCTGCCGCAGCGGCAGAACGTGTTCAACCCG GACCGGCATATCCCGAAACCGGACGACAGTTACTTCATCGAGAACTCGACCCGCGGTGGCCCGGTGAAGACCGTCACCGAACAGCGTGGCCTGTATTCGA CCCTGCGCCTCAAGCTGGCGGAGCCCCTGACCTTTGTCGTCGGCGGCCGGGTCAGCTGGTACCGCTCGAAAAGCGACTCGGTGTTCCTCAGCTCGGGCAC CTCGGAGCACGCCAGGAGCACCGAGACCGGCCAGGTCACGCCCTTTGCCGGCCTGTTGCTGGACCTCAACGACAACCTGACTGCCTATGCCAGCTACGCG GAAATCTTCACGCCCCAGGGCAACTACCGCTCGCAAAGCGGCTCGGCGCTCAAGCCGCTGGTGGGGGAAAGCTATGAGCTGGGGATCAAGGGCGAATGGT TCGAAGGACGCCTGAACAGCTCCTTCAACCTGTTCCAGACCGTGCAGAAGGACCAGGCGCAGACCGACTACAACTCCAGCTGCGCGTCATCGGACGGCTA CTGCTACCTGAACTCCAGCAAGGTCCGCGCCCAGGGCTTCGAAGCCGAGATCAGCGGCGAAGTCATCGAGCGCCTGCAACTGCTGGCCGGCTACACCTAC ACCCAGACCAAGACCCTCGACGACATCGACAGCGGCCTCAACGGCGCTGCCTTCAACAGCTACGTGCCGCGTCATGTGCTGCGCCTGTGGGGCGACTACG CCCTCGACGGCGCGTTCGAGCGCTTCAACATCGGCGCCGGGGTCAACGCGCAAAGCGACAACTTCCGGGTCTCGCAGGCCAATGGCGAAAAAATCACCCA GGCCGGCTACGCGGTATGGAACGGCCGCATCGGCTACCGCATCGACGACACCTGGTCGCTGGCGCTCAACGGCAACAACCTGTTCGACAAGCGCTACTAC ACCACCATCGGCACCGAAAGCTTCGGCAACTACTACGGCGACCCACGCAACTTCACCATGACCCTCAAGGCGCAGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCGGTCAGCCAATAAAAAAACGCCACTCCCGGGAGTGGCGTTTTTGTGTGTGGCTGACTCAGCCGATCTCCACCCATCCCCGGGCGTCATTGGCGCCCA GTAGATCAGCGACCGGTTTCACCGCGATCCGGCCATCCACGGTGCCCAGCGCCAGTTGCCCGGCGTGGGCGTCCATGGCGTGGATGATGGTCGGCAAGCC ATCGATTCGCGCCTTGGCGTTCAGCCGCAGTTGGCCGGTTCGGGTATCGATCAGCATCAGGATGCCATCGAGGAAAGCCGCCGCCACCAGATCTGCTTCG GGTAGGTGAGTGATCGCGCTGGGCGATGCCGGCGTGGGGTGCCGCCACAGTTCCTGGCCGCGCTCCAGGTGCCGGCGGTAGATGAAACCCTGGTACGGGT CGCAGACCGAAGGGTTGTAGTGCTGGCCGGCGATCACCACGCCCGCGCCCAGGGCATCCGCCACATAAGCGCCGCGGCATTCCATGGCGTGGCTGGCCCG
Amino Acid Sequence
>TonB-dependent receptor
MSRVNAPGRLANAVKVALLATSMASACSANADPAAGAAAQQSQVRAYDIGAGSLVDVLTRFSSAAGAAISFDARQTQGRQSPGLKGQFGVDEGFARILRG SGLRAEPQANGSYVLRAVPVLGSALELGATNINGQLLGATTEGSGSYTTGAVTIGKGEHSLRETPQSVTVMTRKMLDDQNLHSIDQVMEKTPGITVYDST MGGKYFYSRGFRMSGQYQYDGVPLDMGNQYVQADSFSGDMAYYDRVEILRGAAGMMKGAGGTAGGVNFVRKRGQGTPQTEVTLSGGSWDNYRGQVDTGGP LNESGTLRGRAVVAEQSRHYFIDDASRKDQVYYGALDFDLSPDTTLGLGIAYEDVDANPCWGGLPRYKDGSDLKLGRSTCLDPSWNTWRSKRTTVFGDLR HQLNDDWALKVAGVYTKNTQDIKYAFASGAVTPGIDTTGMLGSMYDYDQVDYGLDAYLDGKFNAFGLQHELVVGVNGSRADKDDFFSVAFLPQRQNVFNP DRHIPKPDDSYFIENSTRGGPVKTVTEQRGLYSTLRLKLAEPLTFVVGGRVSWYRSKSDSVFLSSGTSEHARSTETGQVTPFAGLLLDLNDNLTAYASYA EIFTPQGNYRSQSGSALKPLVGESYELGIKGEWFEGRLNSSFNLFQTVQKDQAQTDYNSSCASSDGYCYLNSSKVRAQGFEAEISGEVIERLQLLAGYTY TQTKTLDDIDSGLNGAAFNSYVPRHVLRLWGDYALDGAFERFNIGAGVNAQSDNFRVSQANGEKITQAGYAVWNGRIGYRIDDTWSLALNGNNLFDKRYY TTIGTESFGNYYGDPRNFTMTLKAQF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site