Pseudomonas chlororaphis PA23, EY04_RS15705
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis strain PA23, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGAACCGCAGGTTCGTACCGGGTGCTGGCACGTGAACCTGAACCACCTGCGCTCCATTCACCAGGCGGTCAGCCAGGCCCAGGGGCTGTGGGTGGCCAAG GCCGAGAACCACAACGAACACTGGACGTTGAAGCAACTGGACCTGAAGGTGCTGGTGGCCGAAGACAACGTCATCAACCAGTTGATCCTCAGGGATCAGC TCGAAGAGCTGGGCTGCAGCGTGGAGCTTGCGTCGAACGGCGAGGAAGCCCTGTCGATGTGGAACCCCGAGCGGTTCGACCTGGTCCTCACTGACGTCAA CATGCCCGTGATGAATGGCTATGAACTGGCCAAGGAGTTGCGACGCCGTGGCTGTACGGTCCCGATCATCGGTGCCACGGCCAACGCGATGCGTGGAGAA GAAGAGCAATGTCTGGCGGCCGGAATGAACCATTGCCTGGTCAAACCTTTTGCATTACGCGCCCTGTTCAATTACCTAGCGCCCTATGAAAGAGCGAAGA
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| DNA Sequence for Gene |
>EY04_RS15705
ATGAAGCCCTGTAGCATATTGATCGTTGAAGACCATCCCTTCCAGCACATGTACCTGCAGCATCTGTTCGGTGAGCTGGGCCCCTATTACCTGGAAGGCG CAAGGGATGGCGAAGAGGCGCTGGAACGCTTGAAATGGCGCAAGTTCGACCTGGTGCTCACCGACCTGTTGATGCCGGGAATGGATGGCGTGCAGTTCAT CCAGGGACTGGCGGCCCTGCACTCCAAGCCGGCGCTGGCGATCATGAGCTCGGCTTCGCGGCGCATGCTGATGAGCGCCAGCCTGGTCGCCAAGAACCTC GGGGTGAAAGTCATCGGCCTGATTTCGAAACCGGTGAACCTCGCCGCCCTGCAAACCCTAACCACCCAGCTGAGCATCTCGCAGCCGAGCTCGCCACGCC CCTTGCCGACCGCCATGCTCAATCGGGCCGCGCTGGCTCAGGCCATCCAGGAAGAGCAGTTCGAGGCCTGGTTCCAACCCAAGAAATCGCTGTTCAACGG CCGCATCGTCGCCGCCGAAGCCCTGGTCCGCTGGATGCATCCGACACAGGGCATGCTGCTCCCCGACGCCTTCCTGCCCGCCCTCAAGTCCTTCGATCTC GAGGAGGAGCTGCTGTGGCTGGTCCTGCGCCAGGCGATCCAGGCCCAGGCCCGCTGGCGCCAGCATGACTACGACATTCCGGTGTCGATCAACCTGCCGA CCCATCTGCTCAACAGCCACGACCTGGCGGACCGCCTGTTCGACTTTGTCATGGAACATCAGGGCGTACCGGGGCAGATCTGTTTCGAACTCATGGAATG TTCGGTGCCCCAGGACATCAGTAACTTCTATGCCGGCGCCTGCCGCTTGCGCATCAAGGGCTTCGGCCTGTCCCAGGACGACTTCGGCAAGGGCTACAGC TCGTACATGAACCTGGTTTCCACCCCGTTCACCGAGCTGAAGATCGATCGCGCCCTGGTCCAGGGATGCCATGCCAGCGAAGAACTGACCAAGGCCCTGA CCAGCATCATTGCCCTGGGTCGCCAACTGGGCCTGACCGTGGTCGCCGAAGGCGTGGAAAGCGCCGAGGAGTTGGCGCTGTTGCGCAAGATCGACTGTAG CCAGGTGCAGGGGTTCCTGATCTCTCGCGCAGTCCCCTCCGAACAGTTTCAACAGCTGCTGGTGAACGACGGTCCAGCCGCCAGTTATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCGAGGACACCCACCCTTCAGGATTACATGCCCCACATCACTGACAAGTCGTTGTTTAAAGGTAAAATCCTCAAGGCTTCGACTTTTTCATGCTTTTTT GGATACCAGTGATGAACCACCAGGACACGCTTCTCGAGAATCTGAAACGATACTCGACTCGCCTGAACAAGGGATTGTTGATTTTTCTCGGCTTGACCCT GCTGTTGATCGCCATCAGTTACTGGTCGTCACACAAACTGCTAGAAGAACAACACGACAGGTTCAAGGCGCACTTTGCGCGGATGATGGAAGACATCCGC GAACATGAAGACTTCCTCCGCGGCGTCGCCGTACAAGGCACCCAGGTCCCCTTGCGCTCCAGCGACTCGGGTTCGTACCTGAAAAGCGCCTTGCCTGAAG AGGGATTGCACAACTACCTGGGCCAGGAATTCGCCTTTTCCACGCCCTTCAGCCTGTCCGTCAACCAACAGAACATCGCACCTGACACCTTGGCCAGGCT
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| Amino Acid Sequence |
>diguanylate phosphodiesterase
MKPCSILIVEDHPFQHMYLQHLFGELGPYYLEGARDGEEALERLKWRKFDLVLTDLLMPGMDGVQFIQGLAALHSKPALAIMSSASRRMLMSASLVAKNL GVKVIGLISKPVNLAALQTLTTQLSISQPSSPRPLPTAMLNRAALAQAIQEEQFEAWFQPKKSLFNGRIVAAEALVRWMHPTQGMLLPDAFLPALKSFDL EEELLWLVLRQAIQAQARWRQHDYDIPVSINLPTHLLNSHDLADRLFDFVMEHQGVPGQICFELMECSVPQDISNFYAGACRLRIKGFGLSQDDFGKGYS SYMNLVSTPFTELKIDRALVQGCHASEELTKALTSIIALGRQLGLTVVAEGVESAEELALLRKIDCSQVQGFLISRAVPSEQFQQLLVNDGPAASY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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