Pseudomonas chlororaphis PA23, EY04_RS15410

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain PA23, complete genome. [Details]
DNA Sequence Upstream of Gene
GTGCGCCTCAACGAGCACGATTGCCGGGTGTCGGTGGTCAGCGGCTCGGTGCAGCTGCAACCCTTGTTCGGGCCGCAACTGGTGTTGCGCGAAGGCCAGC GGGTCCGGCTGCGCGCGGAGGGCGTCGGGCAGATCGATGCCTTCGACGCGCAGTTGCCGGGCTGGCGCGACGGCGTGCTGATGGCGCAGAACCAGCCGCT GGGGGACTTCCTGCGCGAGCTGAGCCGCTATCGTCCGGGCCTGCTGCGCTGGGACCCGGAACTGGAAGCCTTGCGCGTCACCGGCAGCTTCCGTCTCGAC AACACCGACCGCGTGCTGTCGCTGCTGGCCGCCAGCCTGCCGCTGCAAGTGCATTCGCGCACCCGCTACTGGGTGACGCTGATCCCGCAGAAAAGCCAGC CGAAAAACACCCCGCCAAAAAATATTGGCTGAAGCCTGTCCCTTTTTTTCGCCTCGCCGGTCATTCCAGGTAAGTGAACAAAAAACGAGAGCTTCCTCCC
DNA Sequence for Gene
>EY04_RS15410
ATGCCCGCAGTATTGCCTTACCGTTTGCGCCCGGTTGCCCCCGGCCTGCGCCCGTTGTTGCACTTGGGCCTCATGCTGTCCCTCAGTTCCAGTCCGTTCT TCATCCAGGCCAGCTGGGCCGACGATGCCGCGCGGCGCAGCTATCAGGTGCCGGCCGGCCCGCTGAGCGCCGCGCTGACCCGTTTCGCCGGTCTGGCGGG AGTCAACCTGTCAGTGGACCCGCAGCTGGTCAGCGGGCGCAACAGCAGCGGGCTGTCCGGCGAGTACGGGGTGGAAGAGGGCTTTGCCCGTTTGCTGCAA GGTTCCGGCCTGCAACTGCAACCGGTGGGCGAACAGGCTTATATCCTCACCCCGGCGCCGCAAGGCGGCAGCCTGCAACTGGCGCCGACCTCGATTCTCG GTGCCAGCGGCGCGACCGACAGCGACGTCTTCGCCGGCGGCCAGGTGGCGCGCCGGGGTTCCCAGGGCCTGCTGGGCTCGAAGGACTTCATGGAAACGCC GTTCAGCATGACCACCTATACCAGCGAGGTGGTGAAGAACCAGCAGGCGCGGACCCTCGGCGACCTGATCGCCAGCGACCCTTCGGTGCGCGCCACCAAC CCGGCGGGCGGACGCTACGAGCAATTCACCATCCGCGGCTTCAGCCTGTTCAACAGCGATGTCGCCTACAACGGCCTGTACGGCGTGCTGCCGACCTACA CCATCGACATGGAAATGGCCGACCGGGTGGACATCCTCAAGGGCCCGACCCAGCTGATCAACGGCATCTCGCCGCGGGGCAGCGTCGGCGGCGGGATCAA CGTGGTGCCCAAGCGCGCCACCGACAAGCCGATCACCGAATTCACCGGCAGCTACGCCTCCGACAGCCAGGTCGGCGGTGCGGTGGACATCGGCCGACGC TTCGGCGAGGACAACAAGTTCGGCGTGCGCCTGAACGCGGTCAAGCAGTCCGGCGACACTAAGTGGGATCACCAGAGCGTCGACCGCGAGATGGCGGTGC TGGGCCTGGACTTCCGTGGCGAACGCCTGCGCCTGTCGACGGACATCGGCCACACCGAGCGCGATACCGACGCCCCCCAGGAGCGGGTGCAGATCGGCGC CAACGCCAAGGTGCCGGACGCCGACGATGTGCGACACAACTATGCGCAGTCCTGGAGCAAGGCGCGGACCAAGGACACCTTCGGCACGGTCAACGCCGAA TACGACGTCAATGATTCGATCATGCTGTACGGCGGCGTCGGCGCGCGCAAAAGCAACCACGACTTCCTGCGCCATGCCGTGTCGATCACCAACGACGCTG GCGACTTCAGCGTCCAGCCCCGCGACTTCACCCGCGACGAAAACGTGCGCACCACCACGGCGGGCGTGCGCAGCTGGTTCCATACCGGCCCGGTAAGCCA TGAGGTCAACCTGGCGGCCAGCTACTTCTACATGGATTTCGAAAACGGCGGCGCGCGCTATGCCGCATCCCCCAGCAACCTCTACAACCCACGGCCGACG CCGACGCCGTCGCGGCCGACGCGTTTGGACCCCAAGGTCTACACCGAGAACCGCTTCAGCGGCGTGGCGCTGTCCGACACCCTGGGCTTCTTCGATGACC GCCTGCTGCTGACCCTCGGCGCGCGCTGGCAGCGGGTCAAGGTCGACGACTGGAGCGACGGCGTCAAAGGCGACACCGCCTACGACGAGGAAAAGGTCTC GCCTTCGGGCGGCCTGCTGTTCAAGGCCACCGACCAACTGTCGCTGTACGTCAACTACATGGAAGGCCTGAGCCAGGGCAAGATCGCGCCGTCGACCTCG ATCAACGAAGACGAAATCTTCCCGCCGTTCATCAGTCGCCAGGTCGAGGCCGGCGCCAAGTACGACGCCGGGGCGTTCGCCCTGACCGCCGCGGTGTTCC GCATCAAGCAGCCGGCCTACGAGACCAACGCCACCACCCGAGTCTTCGGCCCGAACGGCAAGCGCCAGAACGACGGCGTCGAGTTGAGCGTGTTCGGCGA GCCGCTCAAGGGCTTCCGCCTGCTGGGCGGGGTGATGTACATCGACAGCGAACTGAAGGACACCACCAACGGCACCTTCGACGGCAACCGCGCGCCGGCC ACGCCGAAGTACAACGTCAACCTGGGCGCCGAGTGGGATGTGCCGAAGGTCCAGGGCCTGACCCTGACCGCACGCGGCATCTACTCCAGCTCGCAGTACC TGGACCAGGCCAACAGCAAGGAAATCGACTCCTGGGAGCGTTTCGACCTGGGCGCGCGCTACGCATTCAAGCTCGACGACAAGGACATCACCTTGCGCGC CAATGTCGAGAACGTGCTGGACAAGCGTTACTGGAGTTCGGCCGGGGCCTCGGACGACAGCGAGCCGGGCTTGACCCTGGCGACGCCACGGACCCTGTTG CTTTCGGCAACCGTAGGTTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAAGCGATGCGGACAAGCGCCACAGGGAAGGGCGCACCACCGTATCGATCGGCCATGACCGGTTCCCCGGTCGAGGAAGGATGTATGCCCGTTATTACAT GATGAACTTGCCGGCCTCTTGAATGAGGTATTGGCCATTTAATGGCAACTAACGAAGTTGTCAGGAAGATGGCAATAACATGGCTAACTCATGGCATCGT TAATGACTTTTCCCAGGTTTATCAACTTGGTTGTTGGCGTGCGCGCGCTATTTAACTTATGCCTGGAAGTGCTATGTAAATTTCCAAATAAGTTCGAATA AGCAGTTGCACCTTTTTATTAATGATAATAATTTGCATGTCGAATTTAACGAGGGTGAACAGATGTTGAATGATGGCATATTGCGCACTAGTCCTCTGCA AAAAACCAATGCCGACTATCTGGCCCGGCAAGGCAAGTTCGAATCCAATGTGCGCAGTTATCCGCGCAAGTTGCCGCTGGCCATCGCCAAGGCACACGGG
Amino Acid Sequence
>TonB-dependent receptor
MPAVLPYRLRPVAPGLRPLLHLGLMLSLSSSPFFIQASWADDAARRSYQVPAGPLSAALTRFAGLAGVNLSVDPQLVSGRNSSGLSGEYGVEEGFARLLQ GSGLQLQPVGEQAYILTPAPQGGSLQLAPTSILGASGATDSDVFAGGQVARRGSQGLLGSKDFMETPFSMTTYTSEVVKNQQARTLGDLIASDPSVRATN PAGGRYEQFTIRGFSLFNSDVAYNGLYGVLPTYTIDMEMADRVDILKGPTQLINGISPRGSVGGGINVVPKRATDKPITEFTGSYASDSQVGGAVDIGRR FGEDNKFGVRLNAVKQSGDTKWDHQSVDREMAVLGLDFRGERLRLSTDIGHTERDTDAPQERVQIGANAKVPDADDVRHNYAQSWSKARTKDTFGTVNAE YDVNDSIMLYGGVGARKSNHDFLRHAVSITNDAGDFSVQPRDFTRDENVRTTTAGVRSWFHTGPVSHEVNLAASYFYMDFENGGARYAASPSNLYNPRPT PTPSRPTRLDPKVYTENRFSGVALSDTLGFFDDRLLLTLGARWQRVKVDDWSDGVKGDTAYDEEKVSPSGGLLFKATDQLSLYVNYMEGLSQGKIAPSTS INEDEIFPPFISRQVEAGAKYDAGAFALTAAVFRIKQPAYETNATTRVFGPNGKRQNDGVELSVFGEPLKGFRLLGGVMYIDSELKDTTNGTFDGNRAPA TPKYNVNLGAEWDVPKVQGLTLTARGIYSSSQYLDQANSKEIDSWERFDLGARYAFKLDDKDITLRANVENVLDKRYWSSAGASDDSEPGLTLATPRTLL LSATVGF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site