Pseudomonas chlororaphis PA23, EY04_RS13265

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain PA23, complete genome. [Details]
DNA Sequence Upstream of Gene
CTGGTGCTGGGCGTGCTTTATGAAAGCTACATTCACCCGTTGACCATCCTGTCCACGCTGCCGTCGGCCGGGGTCGGCGCCTTGCTGTCGATCTATGTGC TGGGCAGCCAGTTCAGCCTGATCTCGCTGCTGGGGCTGTTCCTGCTGATCGGCGTGGTGAAGAAAAACGCCATCCTGATGATCGACCTGGCGCTGCAGTT GGAGCGCCACCAGGGCCTGGGCCCGCTGGAGTCGATCCGCAGCGCCTGCCTGCTGCGCCTGCGGCCGATCCTGATGACCACCCTGGCGGCGATCCTCGGC GCCTTGCCGTTGCTGCTCGGCAGCGCCGAAGGCGCGGAAATGCGCCAGCCCCTGGGCCTGACCATTATCGGCGGCCTGGTCTTCAGCCAGATCCTGACCC TCTACACCACCCCGGTGGTCTACCTCTATCTCGATCGCCTGCGCCATAAATTCAACCACTGGCGTGGGGTCCGTACCGATGCCGCTCTGGAAACGCCGCT
DNA Sequence for Gene
>EY04_RS13265
ATGACTGACTGCTCGCCCCGCAACCTTCCTCAGCGCCTGGCCCTGGCCCGCGGTTCGCGGCTGTTGAGCCTGAGCTTGAGCCTGGCGCTGCTCAGCGCCT GCGCCATCGGCCCGGACTATCAGCGCCCGACCGTCGCCGAGCCTGCGCAATACAAGGAAGCAGCAGGCTGGCGCCAGGCCAGTCCCAGCGATTCCCTGGC CCGTGGCGCCTGGTGGGAACTGTATGGCGACCAACAGCTCAACGGCCTGATCGACAAGCTCAACAGCGCCAACCAGACCGTGGCGCAGTCCGAGGCCCAG TACCGCCAGGCCCAGGCCCTGGTGCGCAGCGCCCGTGGCTCGCTGTTCCCCACGGTCGACCTGAGCGCCGGCAAAACCCGCGCCAGCCAGGGCACCGGCA GCAGCAGTTCGGCCCTGAGCAGCTCCTCCAGCGGCATTCGCGACACCTACAACACCCAGCTCGGGGTGAGCTGGGAGGCCGATGTCTGGGGCAAGCTGCG TCGTGGCCTGGAAGCCAACGAAGCCAGCGCCGAAGCCAGCTTCGCCGACCTCGCGGCGATGCGCCTGAGCCAGCAGTCGGAACTGGTGCAGAACTACCTG CAACTGCGGGTCATGGACCAGCAGAAGCGCCTGCTCGAAGCCACGGTGGCGGCTTACCAGCGTTCGCTGACCATGACCGAGAACCAGTACCGCGCCGGCG TCTCCGGCAAGGACGCGGTGGCCCAGGCGCAAACCCAGCTGAAAACCACCCAGGCCGACCTGATCGACCTGATCTGGCAACGCGCCCAGCTGGAAAACGC CATTGCGGTATTGATCGGCCTGCCGCCGGCCGAGTTCAGCCTGGCCGAGACCCAGGACATCCCGGCCTTGCCCCAGGTGCCCCTGAGCCTGCCGTCGCAA CTGCTGGAGCGGCGCCCGGACATCGCTTCGGCCGAGCGTTCGGTGATCGCTGCCAACGCCAATATCGGCGTGGCCAAGGCCGCCTATTACCCGGACCTGA CCCTGAGCCTGGCCGGTGGCTACAGCAGCAGTACCTACGCCGACTGGATCAGCCTGCCGAACCGCTTCTGGTCGGTGGGGCCGAAACTGGCCATGACCCT GTTCGACGGCGGCCAGCGCTCGGCGGAAGTCGACCGCACCGAGGCGGCCTACGACCAGACCGTGGCCAAGTATCGCCAGACCGTGCTCGACGGCTTCCGC GAGGTGGAGAACTACCTGGTGCAGCTCAAGGTCCTGGAAGACGAGGCCGCGGTGCGCCAGCAGGCCCTGGATTCGGCGCGCGAGTCGCTGCGCCTGACCG AGAACCAGTACAAGGCCGGGGTGATCGCCTACCTGGACGTGGTGGTGGTACAGGCCACCGCGTTGAACAACGAACGCAGCGTGCTGAGCCTGCTGCAAAG CCGGCTGGTCACCAGCGTGCAACTGATCGCCGCCCTCGGCGGCGGCTGGGACGGCCAGCTGCAGGCCAGCAAGGAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CAGGCTGAATCCGTGATAAGCCCGGACAATCGCGTCGCCGGGTTTACGACTGCTGCCTGACCCTTGTAGCCGCTGCCGAGCCCGCGAGGCTGCGAACGGT TTGGGCGGCACTCCGACGTAGCGACCGCAGTTCCTGAAACCACGGCCTGCCTGGATAAATGCGCTGCCTGGTTTCACGACCGCTACGCGGTCGCGCGCAG GCTGCGCCAGCGGCTACATCGATAGCGGCGAGCCTGGCGTTGTCAGGAGCCGGGTCGCTGTCACCGATTTGTTTTATCAGCCGGCTACTTTCGTCCGACT GATGGCTTTTTGCTTACATTGTGAGTGTGTTTCTGCACGCAATCAGTACAATTGCGCCTTTTTACCGCCGGGCATGGAAGCTTCCGGCTCACGCCACGAG ACGTTCATGCTCACCGGTACCTACTCTCCCGCCCTGGTTCTGATTTCCCTGTTTGTGGCGATTCTCGCCTCTTACACCGCGCTCGACCTGACCGGTCGCA
Amino Acid Sequence
>RND transporter
MTDCSPRNLPQRLALARGSRLLSLSLSLALLSACAIGPDYQRPTVAEPAQYKEAAGWRQASPSDSLARGAWWELYGDQQLNGLIDKLNSANQTVAQSEAQ YRQAQALVRSARGSLFPTVDLSAGKTRASQGTGSSSSALSSSSSGIRDTYNTQLGVSWEADVWGKLRRGLEANEASAEASFADLAAMRLSQQSELVQNYL QLRVMDQQKRLLEATVAAYQRSLTMTENQYRAGVSGKDAVAQAQTQLKTTQADLIDLIWQRAQLENAIAVLIGLPPAEFSLAETQDIPALPQVPLSLPSQ LLERRPDIASAERSVIAANANIGVAKAAYYPDLTLSLAGGYSSSTYADWISLPNRFWSVGPKLAMTLFDGGQRSAEVDRTEAAYDQTVAKYRQTVLDGFR EVENYLVQLKVLEDEAAVRQQALDSARESLRLTENQYKAGVIAYLDVVVVQATALNNERSVLSLLQSRLVTSVQLIAALGGGWDGQLQASKE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site