Strain | Pseudomonas chlororaphis strain PA23, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TATATTTATAGAATATTTGTGATGTTATTAATTACATATTATTGATGCTCTCAAGGAGCTTTGCTGGCATGCCTGTGGTCGGACGCACGACTTTTATCGC CGGTCTCAGCCCGGCCCAGGCGCTGGATTTCTGCCTTGACGGCGCCAACTTCCCGAAGATCTTTCCCGGGCGCATCAGCCCTGTGAAAGGTGTGGGTATC GACAGCCTGCGGCTCAGTGCCGGACGCCAGTTCAGCTTTCGGCACGGGATGTGGGGGTGTCATACCGGCGACATGGACGCTGGTTATACGTGAGGTCAGC GCACTGGCCGGGTTGACGACTGTCGCTTCGAGCCTGCGGGCTGGATGGCGACAGCCTCGCGCCCTGTATCCACTCAAGGGCGCAAAAGGGCGACAATTTG TATCCCGGGCATAGGTAGCCGGAGCGTTTCATGTTTAACTTCCGGCCTCTCGATGTTCTTTACAGCTGTTCAATGTCAATCGTTTAAAAGGACTCCGTTC
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DNA Sequence for Gene |
>EY04_RS13245
|tpx
ATGGCTCAAGTCACCCTTAAAGGCAACCCGGTTCAAGTCAACGGCCAACTGCCACAAGCCGGCTCCAAGGCGCCAGCGTTCACCCTGGTGGGCGCCGGCC TGGCCGACATCACCCTGAGCAGCTTTGCCGGCAAGCGCAAAGTGCTGAACATCTTCCCAAGCGTCGACACCCCGACCTGCGCCACCTCCGTGCGCAAGTT CAACGCCCAGGCCAACGACCTGAACAACACCGTGGTGCTGTGCATCTCGGCTGACCTGCCGTTCGCCCAGGCCCGTTTCTGCGGCGCCGAAGGCCTGGAA AACGTGCAGAACCTGTCGACCCTGCGTGGCCGTGAGTTCATCGAAAACTACGGCGTGGCCATTGCCGACGGCCCGCTGGCCGGCCTGACCGCCCGCGCGG TGGTGGTGCTGGACGAGAACGACACCGTGCTGCACAGCGAGCTGGTCAAGGAAATCGCTGAAGAACCTAACTACGACGCGGCCTTGGCCGTTCTGAAGTA A
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CAGGTTTTACAATTATTCACGGCCTGGCCCTGTCCAGGCCGTTTTTATTTGTGCTTCAGTGGCTTAGCAGACACTTGCAAACGTAAGCCCAAGGTAAATT GCCGGTAAAGGCGCTTTGCTAAACACCGGCCAGTGCTTATCTTTCAGCCTTCTGAAAAAGATCCCCTCGCGCCCAATGGTTGATCATTCCATGCAATCCT CCGTTTCCCGCAACTCCCGTCGCTGGCTGCTCGGCCTGCTTGTCCTGTTGGCCATCGTCGGCCTGTGCTGGAAATTCTGGCCGGCCTCGACCACCCACAA GGATGCCGCCGGGCAAAAGGCTGCCGTCGGACACACCGGGCGCAGCGGGTCGATGCGGCCAGGGTTCGGTGGCGCGAGCGGGCCGATCCCGGTGCGGGTG GCACCGGCCACGCGCGGGGACTTCCCGCTGTATTACAAGGCGCTGGGCACCGTCACCGCGCTGAACACCATCAATGTGCGCAGCCGGGTGGCGGGTGAGC
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Amino Acid Sequence |
>peroxidase
MAQVTLKGNPVQVNGQLPQAGSKAPAFTLVGAGLADITLSSFAGKRKVLNIFPSVDTPTCATSVRKFNAQANDLNNTVVLCISADLPFAQARFCGAEGLE NVQNLSTLRGREFIENYGVAIADGPLAGLTARAVVVLDENDTVLHSELVKEIAEEPNYDAALAVLK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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