Pseudomonas chlororaphis PA23, EY04_RS13060

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015628 protein secretion by the type II secretion system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00813
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0015627 type II protein secretion system complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00813
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pch03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR02532 JCVI: prepilin-type N-terminal cleavage/methylation domain IPR012902 Prokaryotic N-terminal methylation site 26 48 1.2E-7
PRINTS PR00813 Bacterial general secretion pathway protein G signature IPR000983 Bacterial general secretion pathway protein G-type pilin 64 82 3.1E-16
PANTHER PTHR30093 GENERAL SECRETION PATHWAY PROTEIN G - - 18 92 1.5E-11
PRINTS PR00813 Bacterial general secretion pathway protein G signature IPR000983 Bacterial general secretion pathway protein G-type pilin 28 53 3.1E-16
MobiDBLite mobidb-lite consensus disorder prediction - - 1 25 -
NCBIfam TIGR01710 JCVI: type II secretion system major pseudopilin GspG IPR010054 Type II secretion system protein GspG 28 158 5.2E-53
Pfam PF07963 Prokaryotic N-terminal methylation motif IPR012902 Prokaryotic N-terminal methylation site 24 48 1.5E-9
Gene3D G3DSA:3.30.700.10 Glycoprotein, Type 4 Pilin - - 42 157 4.8E-34
Pfam PF08334 Type II secretion system (T2SS), protein G IPR013545 Type II secretion system protein GspG, C-terminal 51 157 2.9E-39
SUPERFAMILY SSF54523 Pili subunits IPR045584 Pilin-like 55 157 2.93E-33

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.