Pseudomonas chlororaphis PA23, EY04_RS07630

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF003161
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009288 bacterial-type flagellum
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF003161
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003774 motor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF003161
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0071973 bacterial-type flagellum-dependent cell motility
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF003161
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pch02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pch02040 Flagellar assembly 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.220.30 - - - 5 98 7.4E-24
Pfam PF01706 FliG C-terminal domain IPR023087 Flagellar motor switch protein FliG, C-terminal 224 330 1.2E-41
Gene3D G3DSA:1.10.220.30 - - - 99 195 7.7E-24
Gene3D G3DSA:1.10.220.30 - - - 201 339 6.3E-46
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 201 226 1.1E-63
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 232 252 1.1E-63
PANTHER PTHR30534 FLAGELLAR MOTOR SWITCH PROTEIN FLIG IPR000090 Flagellar motor switch protein FliG 5 338 6.0E-113
PIRSF PIRSF003161 FliG IPR000090 Flagellar motor switch protein FliG 5 339 1.2E-118
SUPERFAMILY SSF48029 FliG IPR011002 Flagellar motor switch protein FliG, alpha-helical 120 331 4.05E-68
Pfam PF14842 FliG N-terminal domain IPR028263 Flagellar motor switch protein FliG, N-terminal domain 10 110 4.0E-34
FunFam G3DSA:1.10.220.30:FF:000007 Flagellar motor switch protein FliG - - 7 91 2.4E-40
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 120 143 1.1E-63
Pfam PF14841 FliG middle domain IPR032779 Flagellar motor switch protein FliG, middle domain 121 194 4.9E-23
NCBIfam TIGR00207 JCVI: flagellar motor switch protein FliG IPR000090 Flagellar motor switch protein FliG 8 337 7.8E-102
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 40 66 1.1E-63
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 278 304 1.1E-63
SUPERFAMILY SSF48029 FliG IPR011002 Flagellar motor switch protein FliG, alpha-helical 9 123 3.66E-25
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 11 27 1.1E-63
FunFam G3DSA:1.10.220.30:FF:000001 Flagellar motor switch protein FliG - - 201 339 1.4E-60
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 254 274 1.1E-63
FunFam G3DSA:1.10.220.30:FF:000004 Flagellar motor switch protein FliG - - 95 197 1.1E-51

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.