Pseudomonas chlororaphis PA23, EY04_RS01580

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain PA23, complete genome. [Details]
DNA Sequence Upstream of Gene
GCGTCGGTTGCCCGGACTGTGGCGCTGGTCGATATCGGAGCCACCCTGACCGCCCTGAGCGTTGTGCATGAAGGGCAGATCATCTATTCCCGCGAGCAGT TGTTTGGTGGGCACCAACTGACCGAGCACATCCAGCGTCGTTACGGGCTGTCGAAAGAAGAGGCCAGCCTGGCGAAAAAGCAGGGCGGCCTGCCGGACGA TTACGCCAGTGAGGTGCTGCAACCCTTTCAGGAGGCGGTGGTGCAGCAGGTTTCGCGCTCGTTGCAGTTTTTCCAGGCCTCCGGCCCGCAGCGCCAGGTC GACTCTATCCTGTTGGCGGGCGGCAGCGCCTCGGTTCCGGGACTTGCGCCGTTGATCGAGCAGCGCCTGGGCTTGCCTGTGCTGATCGCCAACCCCTTCG CTGGCATGAGCATCGGCGGCAAGGTCGACGCCGCGGCCCTGGCCAGCGAGGCTCCATCCTTGATGATCGCCTGTGGGCTGGCCTTGCGGAGTTTCGACTG
DNA Sequence for Gene
>EY04_RS01580
ATGGCGCGGATCAATCTTCTTCCCTGGCGCGAGGCGCGGCGTGAACAACGGCGTCGCCACTTTCTCCTGGGCCTGGCAGCGGCTGCGGCGGTGGCCCTGG GTGCGCTGTTCGCGGGCGACAGGATCATCGACCGGGCGATCGACAGGCAGCTGGCGCGCAACAATCATGTAGGCGCTCAAATAACCTTGCTCGATCAGCG GATCGCCAAGATCGGCGAGCTGAAGCTGCATCGCGAGCAGTTGGTGGAACGGATGAAGATCATCCAGGACCTGCAAGGCAATCGCTCCACCAGCGCGCGG GTATTCGACCAGTTGGCCCGCACCCTGCCGGACGGGGTGTATTTCACCGATGTCAGGATGAGCGGGCAGACCCTCTCCATCACCGGGGCGGCCGAATCGA ACCATCGTGTTTCGGACCTGATGCGCAATCTGGACGCCTCCGACTGGTTCGACGCGCCGAGCCTGACGGAGGTCAAGGCCGCCGGGGCGGACAACGCCGA CCAGGCCAATGTGTTTCAACTGACCGTCCATCAGACCCGGCCCGCCATGGGCGAGGGTGGGCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTTTCCGGCGGGTGGGCGCAGATGCGCCGGATCGATCTCGGCGAGCTGGACATGAGCAACATGGGGGGCTGGCCCGCGCTGGTCAAAGGCGTGGTCTC GGCGCTGGTCATGCTGCTGGTGCTGGCCCTTGGTTACAACCTGTACCTCAAGGATCTGTTGCTGCAACTCGACCAGCGCCGGGCGGACGAGGCCGTGCTG AAACAGCAGTTCGCCAGCAAGGCGCGCCTGGTGGCCAACCTGGGGCCTTACACCGAACAGATGAAGGCCATGGAAACCGCCTTTGACCTCATGCTGCGCC AGCTTCCCAGCGATACCGAAGTGCCGGGGCTGTTGGAAGATATCAGTCGCACCGGGCTTGGCAGCGGGCTGGAGTTCGAAGAGATCAAGCTGTTGCCTGA GGTGGTCCAGCCGTTCTACGTCGAATTGCCGATCCAGATCACGGTCACCGGTGGGTACCACGAACTGGCAACTTTCGTCAGCGGCGTGGCCGGCTTGCCG
Amino Acid Sequence
>pilus assembly protein PilN
MARINLLPWREARREQRRRHFLLGLAAAAAVALGALFAGDRIIDRAIDRQLARNNHVGAQITLLDQRIAKIGELKLHREQLVERMKIIQDLQGNRSTSAR VFDQLARTLPDGVYFTDVRMSGQTLSITGAAESNHRVSDLMRNLDASDWFDAPSLTEVKAAGADNADQANVFQLTVHQTRPAMGEGGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site