Pseudomonas mandelii JR-1, OU5_RS31645
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mandelii JR-1 plasmid, complete sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AACGACGCCGATGCCGTCCTGATGCTGCAATGGGTGCAGCAGCATCTGCCTCGGCACGCTCCACGCCTGGAACGCATGCTGCTCGACTGGGGTGGCAATG CCTCGGGCAGCGGCATCGCCAACATCGACAACACCGGCGAAGTGCACCCGGACACCTACTGGTGGCAGCACTCGGTGGGCAATGTGCGGCGCACGCCATT TCGAACCTTGTGGCTGGATCAACCCGACGCCTTGTTGCAGCAATTGCGCGTGCACCCACGCAAGGTCGGCGGCCGCTGCGCCCATTGCCGCTGGCTGGCC ATCTGCAACGGCAACACCCGCACCCGCGCCTGGGCCGAGGGTGACCTCTGGGGCCAGGACCCCGGTTGTCACCTCAGCGATGAAGAAATCGGCCTGCCGC CGATCAACACGATTGCCTGCATCACCCATTGATTGCCCGTTCGGCCAACCACCTAAAAAGGCTGGGGCCGATCAACCTGATGAAGCACCAAGGACGTTCC
|
|
| DNA Sequence for Gene |
>OU5_RS31645
ATGCCTTTATCGATCGCACTACCGGCAACACTCGAGTCCCTGTTCAGACCGGGCGAAGTCGCCCTGGTCGGTGCCGGCCCCGGCGATCCGCGCCTGCTGA CCCTGCGCGCCTGGAGCCTGTTGATGCAGGCCGACGCCGTGGTCTACGACCGCCTGATCAGCCCGGAACTGCTGACGCTGATCCCGCTGACCTGCGCCCG GCATTACGTTGGCAAGGCCAGTGGTTGCCACAGTTTGCCCCAGGAGCAAATCAACCAGTTGCTGGTGGATCTGGCCGACCAGGGCCAGCGTGTGGTGCGG CTCAAGGGCGGCGATCCGTTCATTTTCGGGCGGGGTGCCGAAGAGCTGGAATACCTGCTGGCGCGCAACGTCGATTGCCAGGTCGTGCCCGGCATTACCG CCGCTTCCGGTTGCAGCGCTTATGCCGGCATCCCCCTGACCCATCGTGACCTGGTCAACTCCTGCCGTTTTATCACCGGTCACCTGCACAACGATGGCGA CTTGAATCTGCCGTGGCACGACCTGGCCGACGACAGCCAGACCCTGGTGTTTTACATGGGGCTGTCGAACCTGGGCATCATCGCACGCAAGCTGATCGAA GCCGGGCTCGCGGCCGACACGCCGGCGGCGTTGATCAGCAATGGCTCGCGCCCCGATCAGCATGTCGTCCGTGGCACGCTGCACCAACTGCCGACCCTGG CGCTGGAGTGCCCGCCCGGGGTTCCGACGCTGACCGTGATCGGCCAGGTCGTCGACCTGTTCGCGACGCAACCCATGGAGCACCCGGCGCGTTTTTATCC GATACAGGCCGTGCAGCGCCGTAAGGTGGCGCTATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AAGCTGCGCTGCTCGTTCCCCTGCTGCTTGTCGGCGCCGTGCAGGCACACGCAGCCTCGACGCCCGCCGCACTGGCCGAGGCCGCCAGCAACTACCAGCA ACATTGCCAGAGCTGCCACGGCGCCACCCGGTTTGGCGGCACCGGGCCTGCGTTGCTGCCGGAGAGCCTGAGCCGGATCAAGCCGGATGAGATCCGCAAG GTGATCAGCAACGGACGCCCAGCCAGCCAGATGGCCGCCTTCAACACGGTGTTCAACCCGGCGCAGATCGACGCCTTGGCGGACTTTCTGCAACAGCCAC CCGCCACCCCGCCGGTGTGGAACGATGACGACATTCGCAACAGCCACATCATCGTCACCGATATCAAGCAACTGCCCAGCACACCGCAGCACGGCGCCGA CCCACTGAACCTGTTCGTGGTGGTGGAAGCCGGCGATCACCACATCAACATCCTCGATGGCGATCGTTTCAACGTGCTGGCCCGGTTCACCTCGCACTTT
|
|
| Amino Acid Sequence |
>uroporphyrin-III C-methyltransferase
MPLSIALPATLESLFRPGEVALVGAGPGDPRLLTLRAWSLLMQADAVVYDRLISPELLTLIPLTCARHYVGKASGCHSLPQEQINQLLVDLADQGQRVVR LKGGDPFIFGRGAEELEYLLARNVDCQVVPGITAASGCSAYAGIPLTHRDLVNSCRFITGHLHNDGDLNLPWHDLADDSQTLVFYMGLSNLGIIARKLIE AGLAADTPAALISNGSRPDQHVVRGTLHQLPTLALECPPGVPTLTVIGQVVDLFATQPMEHPARFYPIQAVQRRKVAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|