Pseudomonas mandelii JR-1, OU5_RS26235
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mandelii JR-1, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGCGTTCATGGACAACACGCCGGCGTTGAGCCTCGCGCCGTTTGCCCATCAGGTCGGCCTGATCGTGCTACGTTCCTTCGGCAAGTTTTTTGGCTTGG CCGGTGTGCGGTTGGGCTTTGTGCTGGCTGAGCGCAAGTTGCTCAAGTTGCTCGCCGAGCAGGTGGGCCCGTGGGCGGTCAGCGGGCCGACACGCGTGTT GGGCCAAGCCTGTTTGCTGGACACCGAAGGCCATGCAAGGCAGCGCGCGCGCAGCGAAGAGGCCGGCAAACGCCTGGCACTTTTACTTGGGCAGTATGGT TTGCAGCCGCAGGGTGGCTGCGCCTTGTTTCAATGGCTGATGACCGAGCATGCCGAAGCGCTTCACGAGTTCATGGCCAGGCGCGGCATCTTGCTGCGGC TGTTCGCCCACAACAGCAGCGTGCGTTTCGGCTTGCCAGCGGATGAAGCCGATTGGCTGCGTCTTGAGCAAGCGCTTCAAGCCTTCGTAAAGGAAGCCCA
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| DNA Sequence for Gene |
>OU5_RS26235
ATGACAACATTGATGGTGCAGGGCACCACCTCCGACGCCGGTAAAAGCACGCTGGTGACGGCGTTGTGTCGCTGGGTCACGCGTCAGGGCGTGCGCGTCG TGCCGTTCAAACCGCAGAACATGGCCCTCAACAGTGCCGTGACCGCCGACGGCGGCGAGATCGGCCGCGCCCAGGCGGTGCAGGCCCAGGCGGCCAACCT GGAACCGCACACTGACATGAATCCGGTGCTGCTCAAGCCCAACAGCGACACAGGCGCCCAGGTCATCATCCATGGTCGCGCGGTCACGACCATGAACGCG GTCGCCTATCACGACTACAAAGCCATCGCCATGCAAGCCGTGCTGGCTTCCCATGAACGATTGAGCGCGGCGTATCCGGTGGTCATGGTCGAAGGCGCGG GCTCGCCGGCCGAGATCAATCTGCGTGCCGGCGACATTGCCAACATGGGCTTTGCCGAAGCGGTGGATTGTCCGGTGGTGTTGATCGCCGACATCAATCG CGGCGGGGTGTTCGCGCATCTGGTGGGCACGCTGGAACTGCTGTCGCCGACCGAGCAGGCGCGGGTCAAAGGCTTCATCATCAACCGTTTTCGCGGTGAC CTCGCCTTGCTGCAACCCGGCCTCGATTGGCTGGAAGCGCGCACCGGCAAACCGGTGATCGGCGTACTGCCGTATGTGATGGATTTGCACCTGGAAGCCG AGGACGGCATCGATCAGCGCCAGGCCGACAAGGCTGAACGCGTGCTCAAAGTGCTGGTGCCGGTGCTGCCGCGCATCAGCAACCACACCGATTTCGATCC GCTGCGCCTGCATCCGCAAGTCGACCTGCAATTCATCGGCCCCGGCCAGGCAATCCCGCCGGCTGATCTGATCATTCTTCCCGGCTCGAAAAGTGTGCGC AGTGATCTTGCTTACCTGCGGGCCAATGGTTGGGACGCGGCCATCAATCGCCATCTGCGCTATGGCGGAAAAGTGCTGGGGATCTGCGGCGGTCTGCAAA TGCTCGGTGAGCAGGTGCACGATCCGCTGGGCCTCGAAGGCGCGCCGGGTTCCAGTGCTGGCCTGGGCTTGCTGGCGTTCGAAACACAGCTCGAAGAAGA GAAGCAATTGCGCAATGTGCGCGGTCGTCTGGCGCTGGAGGATGCGCAGGTCAGTGGCTATGAAATCCATGCCGGGGTGACCACCGGGCCAGCGCTGGAA AACGCTGCGGTGCAGCTGGACGATGGTCGCTGCGATGGCGCGCAAAGTGTTGACGGGCAGATTTTCGGCACCTACCTGCACGGCCTGTTTGAATCCCCGG CGGCGTGCAGCGCGCTGCTGCGCTGGGCGGGTTTGCAGGAGGTGCAGGACGTGGATTACCACGGGTTGCGCGAGCGGGATATCGAACGGTTGGCGGATCT GGTGGAGAAGCATTTGGATACCGCGATGTTGCGTGAGCTCTGCGGTTTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAGGACGCTTTCGCGGGCAAGCCTCGCTCCTACAAGGTCAGGAGCGGCTCAGCCCTGTAGGAGCGAGGCTTGTCCGCGAATAGGCCAGCAGCTACACCGC ATATTTAAGGAATGAACCATGCTGCAACTGATCCTCGGCGGCGCCCGCTCCGGCAAAAGCCGACTGGCTGAAAAACTTGCGTTAGACAGTCACCTCCAAG TGACTTACATCGCCACCAGCCAACCGCTGGACGGTGAAATGAACGAACGGGTCGCCCATCATCGGGCCCGTCGTCCAGCCGAATGGGCGTTGATCGAAGA GCCAATCGAACTCGCCCGCGTATTGCGCGAAAGCGCCCGCGCCGAGCGTTGCCTGCTGGTGGATTGCCTGACCCTGTGGATGACCAATCTGCTGATGCTC GACGACGCCAAACGTCTCGACGCTGAACGCGAAGCCCTGTTGGACTGCCTGGCCTCCTTGCCGGGTGAAATCATTTTTGTCAGCAACGAGACCGGAATGG
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| Amino Acid Sequence |
>cobyric acid synthase
MTTLMVQGTTSDAGKSTLVTALCRWVTRQGVRVVPFKPQNMALNSAVTADGGEIGRAQAVQAQAANLEPHTDMNPVLLKPNSDTGAQVIIHGRAVTTMNA VAYHDYKAIAMQAVLASHERLSAAYPVVMVEGAGSPAEINLRAGDIANMGFAEAVDCPVVLIADINRGGVFAHLVGTLELLSPTEQARVKGFIINRFRGD LALLQPGLDWLEARTGKPVIGVLPYVMDLHLEAEDGIDQRQADKAERVLKVLVPVLPRISNHTDFDPLRLHPQVDLQFIGPGQAIPPADLIILPGSKSVR SDLAYLRANGWDAAINRHLRYGGKVLGICGGLQMLGEQVHDPLGLEGAPGSSAGLGLLAFETQLEEEKQLRNVRGRLALEDAQVSGYEIHAGVTTGPALE NAAVQLDDGRCDGAQSVDGQIFGTYLHGLFESPAACSALLRWAGLQEVQDVDYHGLRERDIERLADLVEKHLDTAMLRELCGF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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