Pseudomonas mandelii JR-1, OU5_RS25690

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0009288 bacterial-type flagellum
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00954
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0071973 bacterial-type flagellum-dependent cell motility
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00954
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00954
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003774 motor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00954
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pman02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pman02040 Flagellar assembly 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.220.30 - - - 6 98 9.2E-24
Pfam PF14841 FliG middle domain IPR032779 Flagellar motor switch protein FliG, middle domain 121 194 1.0E-23
Gene3D G3DSA:1.10.220.30 - - - 99 196 3.5E-24
FunFam G3DSA:1.10.220.30:FF:000007 Flagellar motor switch protein FliG - - 7 91 1.3E-40
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 278 304 1.7E-63
FunFam G3DSA:1.10.220.30:FF:000001 Flagellar motor switch protein FliG - - 201 339 1.5E-60
Pfam PF01706 FliG C-terminal domain IPR023087 Flagellar motor switch protein FliG, C-terminal 224 330 1.5E-41
Pfam PF14842 FliG N-terminal domain IPR028263 Flagellar motor switch protein FliG, N-terminal domain 10 110 3.0E-34
SUPERFAMILY SSF48029 FliG IPR011002 Flagellar motor switch protein FliG, alpha-helical 12 123 5.36E-25
PIRSF PIRSF003161 FliG IPR000090 Flagellar motor switch protein FliG 5 339 1.6E-119
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 40 66 1.7E-63
Gene3D G3DSA:1.10.220.30 - - - 201 339 1.0E-45
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 120 143 1.7E-63
NCBIfam TIGR00207 JCVI: flagellar motor switch protein FliG IPR000090 Flagellar motor switch protein FliG 9 337 2.5E-102
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 254 274 1.7E-63
SUPERFAMILY SSF48029 FliG IPR011002 Flagellar motor switch protein FliG, alpha-helical 120 331 1.7E-68
PANTHER PTHR30534 FLAGELLAR MOTOR SWITCH PROTEIN FLIG IPR000090 Flagellar motor switch protein FliG 6 338 2.9E-113
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 201 226 1.7E-63
FunFam G3DSA:1.10.220.30:FF:000004 Flagellar motor switch protein FliG - - 95 197 1.2E-51
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 11 27 1.7E-63
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 232 252 1.7E-63

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.