Pseudomonas mandelii JR-1, OU5_RS15950
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mandelii JR-1, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGACCCCCGACTTCCAGCGTGAGCAGTTCAGCGCCGTTTATTGCCGGAATCACTCGCGGCACATGCACGCCGGAGTGTTCACCCAACTGCTTGAGTCCG GCATGTTGGGCTTGCAGCTCCAGCGCCGAATAGTCGCCACGGCAGATTTTCAGGACGAAACGCCCTTGATCACTGTCGACCCGAAAATTGAGGTCCTGCT GGCTACCCAGGGCGTGCAACCTTCCACTCAGCCCGTAATGCCCTTCCAGCAGCTCTAGCGCTTGCTCCGCAGACACTTGCGGGCTGGGCAAACTGGCGCG GTGAATCAACGTGGCGAGCGGCATACAACGACCCCTGAAATGTTATTAGGCGCCTATATCGCCACTGCATCGGTCGAGAATCAACCCCCCCCTGGTGCGG CAAATGCCAATTACGACCAACAACCCTCTTGCACCGCCCTGCTCCTGCCGACAAGCTATGCTCATTCGCTTTATCGTCTTACAGAAAAAGGCTGGCCAAC
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| DNA Sequence for Gene |
>OU5_RS15950
ATGCGTATTCTCATCACCGGCGGTGCCGGTTTCATTGGCTCTGCCCTGATTCGCCACCTCATTCGGCACACCGGGCATGAAGTGCTCAACCTGGACAAAC TGACCTACGCCGGCAATCTCGAGTCGCTGACCAGCATTGCCACCGACACCCGCTACGAATTCGTCCAGGCCGATATCGTCGACCAGGCCACCGTCAGTGC GGTACTGGCACGTTTCCAGCCTCACGCGATCATGCACCTGGCGGCAGAATCCCATGTCGACCGTTCTATTGACGGTCCGTCGGACTTCATCCAGACCAAT ATCGTCGGCACCTACAGCCTGCTCGAGGCCACTCGCGCCTACTGGCAGACGCTGGCCGAGCCGGAAAAAAGCGCCTTCCGCTTCCATCACATCTCCACCG ACGAGGTCTACGGCGACCTGCATGGCGTCGACGATCTGTTCACCGAAACCACGCCTTACGCGCCCAGCTCACCCTATTCGGCCAGCAAAGCGGCGTCCGA CCATCTGGTCCGCGCCTGGCAGCGCACCTACGGCTTGCCGGTGTTGCTGACCAATTGCTCGAACAACTACGGGCCGTTCCACTTCCCCGAAAAACTGATT CCGCTGGTGATCCTCAACGCCTTGGCCGGCAAGCCTTTGCCTGTCTACGGTAACGGCCTGCAAGTGCGCGACTGGCTGTTTGTCGAGGATCACGCCCGGG CGCTGCTCAAAGTGGTCACCGAAGGCGTGGTCGGCGAGACCTACAACATTGGCGGTCACAACGAGCAAAAGAACATCGACGTGGTGCGTGGCATCTGCGC GTTGCTCGAAGAGTTGGCACCGAACAAGCCTGAAGGCGTGGCTCATTTCGCTGACCTGATTACCTTCGTCCAGGACCGGCCTGGCCACGACCTGCGCTAC GCCATCGACGCGAGCAAGATCGAGCGCGAACTGGGCTGGGTGCCCGAAGAAACCTTCGAAACCGGCCTGCGCAAAACCGTTCAGTGGTACCTCGACAACC TGGAATGGTGCCGTCGCGTTCAGGATGGCAGTTATCAGGGTGAACGCCTGGGTGCCATCAATACCAAGGAGCTGCTCGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGAAAGGCATCGTTTTGGCCGGTGGCTCAGGCACGCGTCTGCACCCGATCACGCTTGGCGTCTCCAAGCAGCTGTTGCCGGTGTACGACAAACCGATGAT CTACTACCCGATCTCGGTCCTGATGCTGGCCGGCATCAAAGATATTTTGTTGATCTCCACGCCTCAGGATTTGCCGCAATACCGCAACCTGCTGGGTGAC GGCAGTCAGTTCGGCGTCAACTTCAGCTACGCCGAACAGCCGTCGCCGGATGGTTTGGCCCAGGCTTTCCTGATCGGCGAAGAATTTATTGGCGACGATC CGGTGTGCCTGATCCTCGGCGACAACATCTTCCATGGGCAGCACTTTGGCGAACAGTTGAAAAACGCGGCCATGCGCCCTTCCGGCGCCACCGTGTTTGG GTATTGGGTCAAGGATCCGGAGCGCTTCGGCGTGATTGATTTCGACAGAGAAGGCCGCGCCCTGTCGATCGAAGAGAAGCCGAAAAAGCCGAAGTCCAGC
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| Amino Acid Sequence |
>dTDP-glucose 4,6-dehydratase
MRILITGGAGFIGSALIRHLIRHTGHEVLNLDKLTYAGNLESLTSIATDTRYEFVQADIVDQATVSAVLARFQPHAIMHLAAESHVDRSIDGPSDFIQTN IVGTYSLLEATRAYWQTLAEPEKSAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTYGLPVLLTNCSNNYGPFHFPEKLI PLVILNALAGKPLPVYGNGLQVRDWLFVEDHARALLKVVTEGVVGETYNIGGHNEQKNIDVVRGICALLEELAPNKPEGVAHFADLITFVQDRPGHDLRY AIDASKIERELGWVPEETFETGLRKTVQWYLDNLEWCRRVQDGSYQGERLGAINTKELLA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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