Pseudomonas mandelii JR-1, OU5_RS10855
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mandelii JR-1, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCCATGTCCGAAGCCAGTCCGTGTCTGAATTGCGGTGCCTGCTGTTCTCATTTTCGCGTGTCTTTTTTCTGGGGTGAATGCACCTCGGCCGGGGGAACGG TGCCTGACGAGCTAGTCGCACCCATCAGCCCCAGCCGGGTGGCCATGCTGGGCACGGACTGCAAACCCACTCGCTGCGTCGGGCTGGTCGGCGAGGTCGG CAGCACCGTGCAATGCTCGATTTACGACCAACGTTCCAGCACCTGTCGGGAGTTCGACGCCTCCTGGGCCAACGGCGAGGCAAATGTGGATTGCGATGCG GCACGGGCAGCGTTCGGATTGCCGGCCCTGCAACCGGAATTCGAGTTCCCTTATGAGCAGATCGCCTGAATACCGGCGCCTGTAATTACAAAATGTTCGA ATGCAATGTGCCACTACCGTTTGCACTCTTTGTGTGACCTCTATACTCCAAGACATTCGCCAGGGTTCATGGTGTCGGCTGGATAAATACGAGGCGTCCG
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| DNA Sequence for Gene |
>OU5_RS10855
ATGGAGTGGCCAGCTTTATATTTCACGACTCAACTGCCTGAGACTGGCCAGGTCATCCTCAATTGCACCCATAACCCCTTTCTGGTGTTGCTGGCCTATG TGGTCGCCTGTGCGACCGGCTTCGCCACACTGGACATCACCGAGCGGATCGGCCACGCCGAAAAAGCGGCGTCCCAACGTCTGTGGCGCTGGGTTGGTGC CGGGTGTCTGGCGGGCGGTATCTGGGCCATGCACTTTGTCAGCATGCTGGCCTTCCAGGCCCCGATCGAAATCCATTATCAGTTACCCGTCACCCTGATC TCGTTGCTGTTTGCACTGACAGCTTCTTGGCTGGCGATGCATACCCTCAGCCATCCTCATCTGACTTTCTGGAAAACACTGCGGGCCGCGGTATGGATCG GCCTGGGTATCGCGACCATGCATTACGTGGGTATGGCCGCGATGCGCTCCTACGCGACGGCCTATTACAACCCTGCCCTGTTCGCGCTCTCTATCGTGAT CGCAATTGGCGCCAGCCTGGCGGCCCTGTTGATTTCCCGTCACCTGTGCGAGGGCAGCGGCGTGGTTCATCAACTGCTCAAATACACCGCCAGCCTGGTG CTCGGAGCCGGCATCGTCAGCATGCATTTCACTGGCATGGCGGCGCTCAACCTGGTGCTTCCCATCGATAGCCCCCAGCCACTGCCCGACGACAACACCC ACCTGCAACTGGGGCTGACGGTGGCGGTAATGACCTTGCTGATCATCGGCAGCAGCATCAGCGCGGCATTGGCCGACAAGAAGCTGCAACACAAGGAATC CGACCTGAAGCGGGTCAACATCCTGCTCAGCCAACTGGATCAGGCGCGCTTGTCGCTGCAACAGGTGGCGCACTACGACGCGCTGACCAACCTGATCAAC CGCCGCGGCTTCAATCAGATTTTCGCCGAAAAACTGCTCGAAAAGACCAACGAAGGCGGGATGCTTGCCGTGATGTTCCTCGACATCGACCACTTCAAGC GGATCAACGACAGCCTGGGCCATGACGCCGGCGATGAATTGCTCAAGGTCCTGGCCAGCCATATCAAGGATTCGGTACGCAGCCATGACGATGTGGTGGC GCGCTTTGGCGGGGACGAGTTCTGCATCCTCATCGGGCTGCATGAGCTTGAAGAAGCCCGGAGCATGGCCCAACGCATCATGCTGAAGATGAAGGAGCCC ATCGAGCTGTCCGGCCGCAGCATGGTCATGACCACCAGCATCGGCATCAGCGTTTTTCCGCAAGATGGAACGACCTGCGAGGAGCTGCTGAAAAACGCCG ACCTGGCGCTTTACCAGTCCAAGGGCAGCGGGCGCAACGGGCTGCATTTTTTCAGTCCACACATGAAAAACCGTGCCACGCTGGAGCTGCAACTCGAAGA AGAACTGCGGTACGCCCTGCGCAACGACGCCGGTCTGATCCTCTATTACCAACCGATCTACGACCTGAAAAGCGGCCAGGTCACCAAACTCGAAGCGCTG ATTCGCTGGCAACACCCGGTTCACGGGTTGCTGGCACCGGATCGGTTCATTGCCATTGCCGAGGCCAACGGCCTGATCAACGAACTGGATAACTGGGTAT TGCACAAGGCCTGTGAGGACCTTGGAGTGCTGTCTCGCCAGGGGCGCGAAGAACTCAAGATCGCCGTGAACTGCTCGCCGCTGAACCTCGCCCGGGAAGA GTTGGCCGATGAAATCGAAAACGCCCTGCGCATCGCCGGAGTGTCACCACAACGGCTGGAACTCGAAGTCACCGAAAACGCGCTGATGGGCAATCTCGCC AACACCCTGGCGTTGTTGAAGCAGATCCGTTCTCTCGGCGTCTCGCTCTCGATCGACGACTTCGGCACGGGCTATTCATCCCTGGCCTACCTCAAGCGCC TGCCGCTGAACACACTGAAAATCGACCGCTCGTTCATTCAGGACATCCCCAAGGCCACCCAGGACATGGAAATTGTCCACGCCATTATCATCATGGCCCA CACCCTGCATTTACAGGTCGTCAGCGAGGGCGTCGAAACGCCCGAGCAACATGACTTTCTCGAACGCCAGGGCTGCGACCTGGTTCAAGGCCACCTGCTC AGCCGCCCGGTACCGCTGGCCGAGCTGCCTGCGGTGCTGGCCGAAATCAATCAGCGCAAACATTCACGTAGTGTCAGTTCTCTGAGCCTGGCTACGGTAC AACTGCACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGTCGACGGATCCTTTTCCAAAAAGCCCTGCCCCCCATGCAGGCGCATCAGTTGTGCGGCCAAGCCGCTGATCGGCGTGGCCGAGCCCTGTTCGCGGGAG AATTTCACCGCGGTGTCGAGGTCTTTGAGCAGCGTACGCACGTGCCACTTCACCGGCTCGAAACGACTCTCGGCCATTTGCGGGGCGAGGATCTGCAGCG GTTTTGAATCGGCGAACCCTCCCGCCAGCGCCTCGGCGATCAGGCTGGCGTCAACCCCGGAGCGCTCGGCCAGTGCCACCACTTCAGCAATCACCAGTGC ATTGCAGGCAACAATCATCTGATTACAGGCCTTGGTCACCTGCCCGGCGCCGACACCGCCCATGTGAGTCACCCGCTGACCGAGGTTCAACAGCACCGGC CTGACTCGCTCAAGGTCTGCCGCTTCGCCGCCGACCATAATAGCCAGGCTGCCGGCCTCGGCGCCGACGACCCCGCCGGACACCGGCGCGTCCAGCCAAC
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| Amino Acid Sequence |
>diguanylate phosphodiesterase
MEWPALYFTTQLPETGQVILNCTHNPFLVLLAYVVACATGFATLDITERIGHAEKAASQRLWRWVGAGCLAGGIWAMHFVSMLAFQAPIEIHYQLPVTLI SLLFALTASWLAMHTLSHPHLTFWKTLRAAVWIGLGIATMHYVGMAAMRSYATAYYNPALFALSIVIAIGASLAALLISRHLCEGSGVVHQLLKYTASLV LGAGIVSMHFTGMAALNLVLPIDSPQPLPDDNTHLQLGLTVAVMTLLIIGSSISAALADKKLQHKESDLKRVNILLSQLDQARLSLQQVAHYDALTNLIN RRGFNQIFAEKLLEKTNEGGMLAVMFLDIDHFKRINDSLGHDAGDELLKVLASHIKDSVRSHDDVVARFGGDEFCILIGLHELEEARSMAQRIMLKMKEP IELSGRSMVMTTSIGISVFPQDGTTCEELLKNADLALYQSKGSGRNGLHFFSPHMKNRATLELQLEEELRYALRNDAGLILYYQPIYDLKSGQVTKLEAL IRWQHPVHGLLAPDRFIAIAEANGLINELDNWVLHKACEDLGVLSRQGREELKIAVNCSPLNLAREELADEIENALRIAGVSPQRLELEVTENALMGNLA NTLALLKQIRSLGVSLSIDDFGTGYSSLAYLKRLPLNTLKIDRSFIQDIPKATQDMEIVHAIIIMAHTLHLQVVSEGVETPEQHDFLERQGCDLVQGHLL SRPVPLAELPAVLAEINQRKHSRSVSSLSLATVQLH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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