Pseudomonas mandelii JR-1, OU5_RS08785
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mandelii JR-1, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCTGCACCAGCCCCGACTACCTGCCAATTGTCGGCCCTTTGTCTGATCGCCAGGCCTTCGCCGACGCCTACATCGCCCTGAGCAAGGACGCCCGGCAA ACGCCAGACACCCCATGTCCATGGCTGGACGGTTTGTACGTCAACAGCGGCCACGGCTCACGAGGGCTGATTACCGCGCCGTTGTCAGGCGAGTTGCTCG CGGCCTGGCTCGACAACGAACCGCTGCCATTACCCAGAGCCGTGGCCGAGGCGTGCCATCCGAATCGTTTCGCCTTGCGTCGCCTGATCCGGGGTAAATG AATCCGCATTCTGACGGTTTAATTGATCGATCTATCGGGTGCGGACCGGCGTTTTCGGCTGAAGACGCCTCCCTGCACATTCCCTCTTATTACTTATCGA TCTAAAACTCCCGCGATCCCACCGGGTCAGTTTCTGAGTACCCGCCGTTTTTGGCGGGTATCGATTGACCCTCCCCAACGGAAAAACCGGTAAGGACTTT
|
|
| DNA Sequence for Gene |
>OU5_RS08785
ATGTGCGGATTAGCTGGCGAGTTACGCTTTGATCATCAACCTGCGGACCTTGCAGCCGTTGAACGAATCACCCATCACTTGGCCCCTCGTGGCCCTGACG CGTGGGGCTTCCACAGCCAGGGGCCGATTGCCCTGGGCCACCGTCGCCTGAAAATCATGGACCTGTCGGACGGCTCGGCGCAGCCGATGGTCGACAACCA ATTGGGTTTGTCCCTGGCCTTCAATGGCGCGATCTACAACTTCCCGGAACTGCGCACCGAACTGGAAAGCCTCGGTTATGCCTTCTATTCCGGTGGTGAC ACCGAGGTGCTGCTCAAGGGTTATCACGCCTGGGGCGAGGCACTGCTGCCGAAACTCAATGGCATGTTCGCCTTCGCGATCTGGGAACGCGACGCCAAGC GCCTGTTTATCGCGCGTGACCGTCTCGGCGTGAAGCCGCTGTACCTGTCGCGCACCGGCCAGCGCCTGCGCTTTGCCTCGGCGCTGCCGGCGTTGCTCAA AGGCGGCGACATCAACCCGATCCTCGATCCGGTGGCACTCAATCACTATCTGAATTTCCACGCCGTGGTCCCGGCACCGCGCACCTTGCTGGCTGGCATC GAAAAACTGCCACCGGCCACCTGGATGCGCATCGAAGCGGACGGCACCACTGAGCAGAAAACCTGGTGGACCCTGCCTTACGGCCCACACGCCGACGAGA TGAACCTGACGCTCGAAGACTGGCGTGACCGTGTACTCGACAGCACCCGCGACGCGGTGGCGATCCGTCAACGTGCGGCCGTGGACGTCGGCGTACTGCT GTCGGGCGGTGTCGATTCGAGCATGCTGGTGGGTCTGTTGCGTGAAGTCGGCGTGGAAAACCTGTCGACCTTCTCTATCGGTTTCCAGGATGCCGGCGGC GAACGTGGTGATGAGTTCCAGTACTCGGACTTGATCGCCAAACACTACAACACGCAGCACCATCAACTGCGCATCGACGAGAAAGAGATCATCGAACAAC TGCCCGCGGCGTTCCGCGCCATGAGCGAGCCGATGGTCAGCCATGACTGCATCGCCTTCTACCTGCTGTCACGGGAAGTGGCCAAGCATTGCAAAGTGGT GCAGAGCGGCCAGGGCGCGGACGAGTTGTTCGCCGGCTATCACTGGTACCCACAAGTCGATGGCGCCGCCGATCCGTACGCGGCCTATCGCGATGCGTTC TTCGATCGCAGCTACGAGGATTACGCCGCCACCGTGCAACCGAAATGGCTGACGGCCAATGACGCTGCCGGTGACTTCGTGAAGGAACATTTCGCACAGC CCGGCGCCGAGGCGGCGGTGGATAAAGCCCTGCGTCTGGACAGCACGATCATGTTGGTGGACGACCCGGTCAAACGTGTCGACAACATGACCATGGCCTG GGGCCTGGAAGCGCGCACACCGTTTCTCGACTATCGCCTGGTGGAATTGTCGGCCCGGGTGCCGGGCAAATTCAAACTGCCGGACGGTGGCAAGCAAGTC TTGAAAGAGGCTGCTCGACTGGTCATTCCAAGCGAAGTGATTGACCGCAAGAAAGGTTACTTTCCGGTGCCGGGCCTCAAGCATTTGCAGGGCGATACGC TGAACTGGGTGCGCGAACTGCTGCTCGATCCAAGCCAGGATCGCGGCCTGTTCAACCCGGCCATGCTCGACCGCCTGCTGACCGATCCGCAAGGCCAGTT GACTCCGTTGCGCGGCTCCAAGCTGTGGCAATTGGCGGCGCTGAACCTGTGGCTCAGTGAACAAGGAATCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCGATGAAACCCCACGCCACGGCTTACAGCCAACGCTTGTTGCGCGGTCAGTCCCCCTCCTATGAACGTTTGCAGGCACGGCTGGCCGAAGACGGCAGTG AACTGGGCGCGGCGCCGATTGCGGTGCATTGCGGCTGGGGCCGGTTGCTGATCGGCCATACCTTCCCGGACGCGGCGAGCCTGGCGCAAGAGTTGCTCAA CGAGCAGCCCGGTGAGCGCGACATCGCCTTGTACGTGGCCGCCCCCCAGCAAGTGTTGGGGCTGGAACCGGCGCAACTGTTCCTCGACCCTTCCGACACC TTGCGTTTGTGGTTCAGCGATTACCGTCAGTCAACCCGGGTGTTTCGCGGCTTTCGCATTCGCCGGGCGCAAAGCGAGACTGATTGGCAGGCGATCAATC AGCTGTACCAGGCGCGCGGCATGTTGCCCATTGATGCGAATTTGCTGACGCCGCGACATCAGGGCGGCCCGGTGTATTGGCTGGCCGAAGATGAAGACAG
|
|
| Amino Acid Sequence |
>asparagine synthase
MCGLAGELRFDHQPADLAAVERITHHLAPRGPDAWGFHSQGPIALGHRRLKIMDLSDGSAQPMVDNQLGLSLAFNGAIYNFPELRTELESLGYAFYSGGD TEVLLKGYHAWGEALLPKLNGMFAFAIWERDAKRLFIARDRLGVKPLYLSRTGQRLRFASALPALLKGGDINPILDPVALNHYLNFHAVVPAPRTLLAGI EKLPPATWMRIEADGTTEQKTWWTLPYGPHADEMNLTLEDWRDRVLDSTRDAVAIRQRAAVDVGVLLSGGVDSSMLVGLLREVGVENLSTFSIGFQDAGG ERGDEFQYSDLIAKHYNTQHHQLRIDEKEIIEQLPAAFRAMSEPMVSHDCIAFYLLSREVAKHCKVVQSGQGADELFAGYHWYPQVDGAADPYAAYRDAF FDRSYEDYAATVQPKWLTANDAAGDFVKEHFAQPGAEAAVDKALRLDSTIMLVDDPVKRVDNMTMAWGLEARTPFLDYRLVELSARVPGKFKLPDGGKQV LKEAARLVIPSEVIDRKKGYFPVPGLKHLQGDTLNWVRELLLDPSQDRGLFNPAMLDRLLTDPQGQLTPLRGSKLWQLAALNLWLSEQGI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|