Pseudomonas mandelii JR-1, OU5_RS07335
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mandelii JR-1, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGGGTTGGCATTCTGGCTGCTGGCGACTTTCTCTCTGAGTATTTACGAACAAGGCACGCGCCTGCCGGAAATCGCCCTGCGCAACGCCGCCGGCGAAA CCGTGCAACTGGCGGACTACAAGGGTGGACCGCTGGTCATCAATCTCTGGGCCACCTGGTGCCCGCCGTGCCGCCGGGAAATGCCGGTGCTGGAAAACGC CCAGCAACAGCGCCCGGACCTGACCTTCCTGTTCGTCAATCAGGCCGAAAGCATGCAAAGCGTCAGCACCTTCCTCGAAACCCAAGGCCTGAGCCTGACC AACGTGCTGTTCGACGGCAGCGGTCGACTGGGTCAGGCCGTGGGTTCCATGGCATTGCCGACTACGCTGTTCTATAGCCCCGACGGTCGATTGCTGGGCA GCCATTTGGGTGAACTCTCGGATGCCAGCCTGGCCCGCGCCCTGGAAAACTTCGACACCCCTTCTCCTGCCGTACCGGCCACCTCTTCAAGGAAACTGCC
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| DNA Sequence for Gene |
>OU5_RS07335
ATGCCCCGCCTCCGCCACCTGCTGACGCTGACTCTGGGCGCAGCGCTGCTGCACCTGCCGTCGGTGCAGGCCGCCGAAGAATTGCCTGAAGCGATCAAGA AGATCGAAGCCAAGGGCGCGAAAATCGTCGGTCAGTTCGACGCACCCGATGGGCTGCGCGGTTACGCCGCCCAGTACCAGAACCGCGGTATCGCGCTGTA CCTGACCCCGGACGGCAAGCATGTACTGCTGGGCAATCTGTACGACGCCGAGGGCAACGACCTGAGCAGTGCACCGTTGCAGAAACTGGTCTACGCGCCG ATGTCCAAGGAAGTCTGGGCCAAGATGGAAGCCAGCAACTGGATCGCCGACGGCAAAAAAGATGCGCCACGCATCGTGTACTTGTTCAGCGACCCGAACT GCCCCTACTGCAACATGTTCTGGGAACAGGCTCGGCCGTGGGTCAATGCCGGCAAAGTGCAGCTGCGGCACATCATGGTCGGGATCATTCGCGAAGACAG CCCGGGCAAATCCGCCGCGCTGCTAGCCGCCAAGGACCCGAGCAAGGCGCTGGAAGATCACGAAAAATCCGGCAAGGGCAGTTCGCTGAAAGCCCTGAAG GACGTGCCGCCGGCGATTCAGGCGAAACTGGCGGCGAACATGCAGTTGATGGAAGACCTGGAACTGCAGGCCACCCCGGCGATTTTCTACATGGACGACA AGGGCGAGCTGCAACAGCAGCAAGGCGCGCCTTCGCCGGACAAGTTGATGAAGATTCTCGGGCCCAAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTTGCTGCAGAGACTTTGTGACCACACCGGCCCCATCGCGAGCAGGCTCGCTCCCACATTTGAATGCATTCCCCTGTGGGAGCGAGCCTGCTCGCGATGG GGCCAGCAAGACCGACTAATTTCTCTCGGCTAAAAACTTCAACAACGCCTCCGTCACAAACGTCGGATTCTCCAGATTGGAGATATGCCCCGCCTCCGGC ACCAGCACATACGGGCAGCCAATCAACCCGGCCATTTCCTTCGTTTCCGACGGCGGCCGCGGTTTGTCCTGATCGCCACACATCACCAGCGTGGTGGCAG GGTTCAGCTCGCCCAGACGCGGCAACAGATCATCCCGCCCAAACGTAATCCGCCCCATCGGCACAATGCTTTCACGCAGACGTTCGGACGGCAACGCCGC CAGTTTCGCGCGAAAATCCTGATACAGGGCCGACTGTGGATCGGTGCCCGGACGGAAGAAAATCGGCACCACGATGTCGAGCAACTGCGGCGCGATCACG
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| Amino Acid Sequence |
>dihydroneopterin aldolase
MPRLRHLLTLTLGAALLHLPSVQAAEELPEAIKKIEAKGAKIVGQFDAPDGLRGYAAQYQNRGIALYLTPDGKHVLLGNLYDAEGNDLSSAPLQKLVYAP MSKEVWAKMEASNWIADGKKDAPRIVYLFSDPNCPYCNMFWEQARPWVNAGKVQLRHIMVGIIREDSPGKSAALLAAKDPSKALEDHEKSGKGSSLKALK DVPPAIQAKLAANMQLMEDLELQATPAIFYMDDKGELQQQQGAPSPDKLMKILGPK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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