Pseudomonas mandelii JR-1, OU5_RS06460 (ampC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mandelii JR-1, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCAGTCGCGGCAACAGCCAACCCACCGCAAAGGTCCCCACGGCACCCACGGTCAACACTTCACGAAAATGCCCGCCCTCGAAACGTTCAAGGGTTTCGGC AATCCGGTCAAAGGACTCGCGCAACACCGGCAGCAAGGTTTCGCCTTCACTGGTCAGCATCAGGCCGCGGGGTAAGCGTTTGAACAGCGTTACGTTAAGC TGGGCTTCAAGGCTTTTGACTTGATGGCTGACCGCCGCCGGCGTGACGAACAACTCCACCGCTGCCCGAGTAAAGCTCAAATGGCGTGCGGAAGCCTCGA AGGCCCGCAATGCGTTCAGCGGCAGATGAGGACGAATCATGCCCACTCCCAAATTTTTCTAATGGCTAACCCGAAATATCGTCGTTTGTCGATTTTCGCC CGACTGCCTAGATTTGGCGCGCCCATCAGCCGTCCGGTGTTGGATCCGGACGGAGTGTAGCGGTTAAAGTAATGGCAACTCATGGAGAGTGATTCCAATC
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| DNA Sequence for Gene |
>OU5_RS06460
|ampC
ATGTTCAAATTTCAATTGCCAAGACTGGCGTCCCTCAGCGCTTTCGCCCTGTTCCTCGGCGCAAGTCACTGTATGGCCGCAACAAAATCCGACGATCAGC TCGACGCCCTGGTGAAAGCCGCCATCGGGCCGGTCATGCAACAACAGAATATCCCTGGCGTCGCGGTCGCGATCACCTTAAAGGGTCAGCAGCATTACTT TAATTACGGCATGGCGTCGAAAGAGGACGGTAAACCCGTCAGCAAAGACACGCTGTTCGAAATCGGCTCCGTGAGTAAAACCTTTGCCACCACGTTGACG GCTTACGCCCAGGCGAGCGGCAAACTGTCTTTGTCTGACCGGGCCAGCCAGGTGTGGCCTGATCTGCGCGGCAGTGCATTCGACACCATCAGCGTGTTGC AACTCGCCACTTACACCGCTGGCGGGTTGCCGCTGCAGTTTCCTGACGAGGCCGATCATCCAGACAAAATGCTCGCCTACTTCAAACAGTGGAAGCCCGT TTATGCCGCAGGCACCCACCGCCAGTATTCGAACCCCAGCCTTGGGCTGTCCGGTTATCTGGCGGCCAAAAGCATGGGCCAGTCGTTCGATGAGCTGATG GAAAAAAACCTGCTGCCCAAACTCGGCCTCAAGCACACCTATCTCAAGGTGCCGCAGGATCAGATGGGGCTTTACGCCCAGGGTTACGGCAAGGATGGCA AACCGGTGCGGGTGAGCCCGGGAGCGCTGGATTCGGAGGCGTATGGGGTGAAAACCAGCGCGGCGGATTTGCTTCGTTATGTTGAAGCGAACCTGAAACC GGCGACGCTGGAGAAGCCATTGCAACAAGCGATCGCCCTCACTCACAGCGGTTACTACACCGTGGGCGAGATGACGCAAGGCTTGGGCTGGGAGCACTAC CACTATCCGGCCAGCCTCGAAACGTTACTGAGTGGCAACTCGACGGAGATGGCGATGGTGGCGCACAAAGTCCAGTGGCTGAACCCGCCACAACCTGCGC AAGACGCGGCATGGTTCAACAAGACCGGGTCGACGGGTGGTTTCGGCGCGTATGTCGCGTTCGTGCCTTCGGAAGACATCGGTATCGTGATTCTGGCGAA CAAGAATTACCCGAACGCCGAGCGAATCAAGATCGCTCACAACATATTGAGTGCCCTTACCGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCTCACCGCTTATCTGTGGCGAGGGAGCTTGCTCCCGTTGGGTGGCGCAGCCACCCCAAAACTATTCAGCACGGTTTATCAGATACACCGAGGTAAATG GCCTTGGGGCCGCTTCGCAGCCCAACGGGAGCAAGCTCCCTCACCACAGGGGTCAATGCTGGCAATAAAAATGGGCGACCTCTTTGGGGTCGCCCATTGT CGTTATTACGTCGGCTCAATGCCGAGTCGGCGCTGGAGCGTCAGGCGCATCGTTCCTCGGATCAAGATTGTCCCGAGCCTGAGCCACCAACAACTCTGCA ATCCCCGCCAACTGCTGAATCGCCCCCAGCATCACCCTGTTCGAGCCATCCAGCTTGACGGCAAAATTCACAAGCACCGCATTCAGCGACGCAAGGGTTT CGCTGGCCTGATGCAAGAGAGTGAGGGTGTCGACGCCCGGGGCAACAGACAAGATCTGGTTGATCGGGACGGAACGTCTGGGCTTGCGCACTCGAATGCG
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| Amino Acid Sequence |
>class C beta-lactamase
MFKFQLPRLASLSAFALFLGASHCMAATKSDDQLDALVKAAIGPVMQQQNIPGVAVAITLKGQQHYFNYGMASKEDGKPVSKDTLFEIGSVSKTFATTLT AYAQASGKLSLSDRASQVWPDLRGSAFDTISVLQLATYTAGGLPLQFPDEADHPDKMLAYFKQWKPVYAAGTHRQYSNPSLGLSGYLAAKSMGQSFDELM EKNLLPKLGLKHTYLKVPQDQMGLYAQGYGKDGKPVRVSPGALDSEAYGVKTSAADLLRYVEANLKPATLEKPLQQAIALTHSGYYTVGEMTQGLGWEHY HYPASLETLLSGNSTEMAMVAHKVQWLNPPQPAQDAAWFNKTGSTGGFGAYVAFVPSEDIGIVILANKNYPNAERIKIAHNILSALTE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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