Pseudomonas mandelii JR-1, OU5_RS06250 (fadH)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mandelii JR-1, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGGGCAGCACGACGATGGTCTTTTCATTGAGCAAGCCTTGGTCCTGGGCCTGCTGCAAATAGGCGGCGAGCTTGCGGTGCAGGCGTTCGGGGCTTTGATA GTCGGTGGGAAACAGCTCGGGCTGGATACCCAGCAGATTGCCGCGATCGGCGGGTGTGCCTTGATCGACCGCGAGTTGGATGCGCAGGTCCGACAGGTAA TGACCCACCGGACGGTCCGCGGCCCACATGGCGTAGGTCGTGAGGGCGGCAATCAATGCCATGGAGAAAGTCAGGTACAGAAGTTTGCGCATGGAAAACA GTCGACAGCCGTGTGCAGGGTTCGCGACTAGGGTAGGGCCCCTGCCGACGCTTGCCAAGGGGCGCTGCACATTTGGATCAATAAGTTGTCAGTTTCGGTC ATTGAGTGACGGGGGCGCGACTCTTAGTCTGTCCAACATGACTGACGGGGGCCGAAGAGCTCCTGCATTTTTTCCGTGATCGCTCGATGTGGAGTTACAA
|
|
| DNA Sequence for Gene |
>OU5_RS06250
|fadH
ATGGCCGCCGCTCATTACCCGCACCTGTTGGCCCCGCTGGACCTGGGTTTCACCACGCTGCGCAACCGCACCCTGATGGGTTCGATGCACACCGGTCTTG AGGAAAAGCCTGGTGGTTTCGAACGCATGGCGGCGTACTTCGCCGAGCGTGCTCGCGGCGGTGTCGGCCTGATGGTCACCGGCGGCATTGGTCCGAACGA TGAGGGCGGGGTGTATTCCGGCGCGGCCAAACTGACCACCGAGGAAGAAGCGCTCAAGCACCAGATCGTGACCCGTGCAGTGCACGAGGCGGGCGGCAAG ATCTGCATGCAGATCCTCCACGCCGGTCGTTATGCCTACAGCCCGAAACAGGTCGCGCCGAGTGCCATTCAGGCGCCGATCAACCCGTTCAAGCCTAAAG AGCTGGACGAGGAAGGTATCGAGAAGCAGATCAGCGATTTCGTCACGTGCTCGACCCTGGCGCAAAAAGCCGAGTACGACGGCGTCGAGATCATGGGTTC GGAAGGTTATTTCATTAACCAGTTCCTCGCCGCCCACACCAACCACCGCACCGACCGTTGGGGGGGCAGCTACGAAAACCGTATGCGCCTGCCGGTGGAA ATCGTCCGCCGTGTACGCGAAGCGGTCGGCCCGAACTTCATCATCATCTTCCGCCTGTCGATGCTCGACCTGGTGGAAGGCGGCAGCAGCTGGGAAGAGA TCGTGACCCTGGCCAAAGCCATCGAGCAGGCCGGCGCGACCATCATCAACACCGGCATCGGCTGGCACGAAGCGCGGATTCCGACCATCGCCACCAAAGT GCCGCGTGCGGCGTTCAGCAAAGTCACGGCCAAGCTGCGTGGTTCGGTGAGCATTCCGTTGATCACCACCAACCGCATCAATACGCCAGAAGTGGCCGAG CAGATTCTGGCCGAAGGCGATGCCGACATGGTGTCCATGGCGCGGCCGTTCCTCGCCGACCCGGACTTCGTCAACAAGGCGGCCGCTGGCCGTGGCGACG AAATCAATACCTGCATCGGTTGCAACCAGGCATGCCTGGATCATACCTTCGGCGGCAAGTTGACCAGCTGCCTGGTGAACCCCCGTGCTTGCCATGAAAC CGAGCTTAACTACCTGCCCGTGCAGCAGATCAAGAAAATCGCCGTGGTGGGTGCCGGTCCTGCGGGCCTGTCCGCGGCCACTGTGGCGGCCGAGCGTGGG CACTCGGTGACGCTGTTTGATTCGGCCAGCGAGATTGGCGGTCAGTTCAACATTGCCAAGCGTGTGCCGGGCAAGGAAGAGTTCTTCGAAACCCTGCGCT ATTTCAACCGCAAACTGCAAACTACCAACGTCGAGGTGTGCCTGAACACCCGTGTCGACGTGGCGAAACTGGTTGAGGGCGGTTACGACGAAATCATCCT GGCCACCGGCATCGCCCCAAGAACCCCGGCGATTCCCGGCGTTGAAAACGCCAAGGTGCTGAGCTACCTGGACGTGATTCTCGAGCGTAAACCGGTGGGC AAGCGTGTCGCGGTAATTGGCGCAGGCGGTATCGGTTTCGACGTGTCGGAATTCCTGGTTCACCAAGGCGTTTCCACCAGTCTGGACCGCGATGCGTTCT GGAAGGAGTGGGGCATCGACACGCATCTTGAAGCGCGCGGCGGTGTTGCCGGCATCAAGGCTGAACCCCATGCGCCGGCTCGCGAGGTGTTCCTGCTGCA ACGCAAGAAATCCAAAGTCGGCGACGGCCTGGGCAAAACCACGGGCTGGATTCATCGCACCGGTCTGAAGAACAAGCAGGTGCAGATGCTCAACAGCGTC GAATACTTGAAGATTGATGATGAAGGCCTGCACATCCGCATCGGCGAAACCGGTGAGCCGCAGGTGCTGCCGGTGGACAACATCGTGATCTGCGCCGGGC AGGATCCGCTGCGTGAATTGCAGGAGGGTCTGGTGGCTGCCGGGCAGAACGTGCATTTGATTGGTGGCGCGGACGTGGCGGCGGAGTTGGATGCCAAGCG CGCGATCAATCAGGGTTCGCGGTTGGCTGCTGAGTTGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCAACTCAATCCCTGTGGCGAGGGAGCTTGCTCCCGTTGGAGTCCGAAGGACTCCCTCTATCAGCGATCGTGGTGTGTCAGGTTAATCACTGTCGCCAGT TTTGCGGCCGCTGCGCAGCCGAGCGGGAGCAAGCTCCCTCGCCACACATTGGCTGCTAAGATGCCGACTCTTCACCCAGAGCCGGCATTGATGCTTCTCC CTCCCAACGACTGGCTACCCCAAGCCCCGCTCCAGCCCCTTGACCTCGACTGGCTCACCACGGCCAGCATCGAAGTCGCCATCCTGCGTCTCGACCGGAT CGACCCACTGATCAGCGGCAACAAGTGGTTCAAACTCATCGAACACCTCAACGCCGCTGACCGGATCGGCGCCCAAGGCATCATCAGCCTCGGCGGTGCC CACTCCAATCATCTGCATGCACTGGCAGCTGCCGGCAAACGTTTCGATTTCAAAACGGTCGGCCTGCTGCGCGGTCATCCGCTGGAAACACCGACGGTGA
|
|
| Amino Acid Sequence |
>2,4-dienoyl-CoA reductase
MAAAHYPHLLAPLDLGFTTLRNRTLMGSMHTGLEEKPGGFERMAAYFAERARGGVGLMVTGGIGPNDEGGVYSGAAKLTTEEEALKHQIVTRAVHEAGGK ICMQILHAGRYAYSPKQVAPSAIQAPINPFKPKELDEEGIEKQISDFVTCSTLAQKAEYDGVEIMGSEGYFINQFLAAHTNHRTDRWGGSYENRMRLPVE IVRRVREAVGPNFIIIFRLSMLDLVEGGSSWEEIVTLAKAIEQAGATIINTGIGWHEARIPTIATKVPRAAFSKVTAKLRGSVSIPLITTNRINTPEVAE QILAEGDADMVSMARPFLADPDFVNKAAAGRGDEINTCIGCNQACLDHTFGGKLTSCLVNPRACHETELNYLPVQQIKKIAVVGAGPAGLSAATVAAERG HSVTLFDSASEIGGQFNIAKRVPGKEEFFETLRYFNRKLQTTNVEVCLNTRVDVAKLVEGGYDEIILATGIAPRTPAIPGVENAKVLSYLDVILERKPVG KRVAVIGAGGIGFDVSEFLVHQGVSTSLDRDAFWKEWGIDTHLEARGGVAGIKAEPHAPAREVFLLQRKKSKVGDGLGKTTGWIHRTGLKNKQVQMLNSV EYLKIDDEGLHIRIGETGEPQVLPVDNIVICAGQDPLRELQEGLVAAGQNVHLIGGADVAAELDAKRAINQGSRLAAEL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|