Strain | Pseudomonas mosselii SJ10, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGCGAGCTGCTGCTGATGCTCAAGGCGCAGGGCCTGAAGGTGGCCCTGGACAGCAGCGGCGAAGCCTTGCGCGCAGGCCTGCAGGCCGCACCCTGGCTGG TCAAGCCCAACACCGAGGAACTGGGTGAAGTCCTCGGGCTGCCGGTGCAGGCTGCGGACGAGCAACGCGCGGCCGCACGGCGGCTGCTCGCCACTGGCGT CGAGCATGTGGTGGTGTCCCAGGGCGAGCAGGGCGTGAACTGGTTCGCCGCTGGCCTGGCGCTGCATGCGCAACCGTCGAAAGTGCGCATCGCCAGTACC GTCGGCGCCGGTGATTCGCTGGTTGCCGGCATGGTCCATGGCCTGCTCCAGGCCGAAGCGCCCGCCGCTACCTTGCGCCGCGCCACCGCCATCGCCGCCC AGGCAGTCACCCAGGTCGGCTTCGGCATTCACGACCGTGAGCAACTGGAGCGTCTGGAAGCCGCCGTGCGCCTTACAGAACAACAAGAAGAGGGCTGCTG
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DNA Sequence for Gene |
>O165_RS27615
ATGAACATTGCCATTGTCACCGCCTGCCCCAACGGCCAGGTGTCCAGCGTGCTCAGCGCCCGCTTGTTGGCCGCCGCGGCCCAGCGTCGGGGCTGGAAAA CCTGCGTCGAGGTGCACGACGCCGAACATCCGGAGCTGCGCCTGACGCCAACGCAGATCGCCGAGGCCGATTGGGTGCTGGTGGTCAGCACCGGGCCGGT GGACCTGGCGCGCTTCGCCGGCAAACGCCTGTACCAGAGTACGCCGGCCCAGGCCCTGGCCGACCGTGAAGGCTTCCTCGACGAGGCTGCTGCCGGCGCC CAGGTGCAAGTGACGCAAACCCCGGTGCAGGGTGCGCCGAAGATTGTCGCTGTGACCGCCTGCCCGACCGGCGTGGCCCACACCTTCATGGCCGCCGAAG CCCTGCAACAGGCGGCGCAGGCCATGGGCTACCAGCTCACCGTGGAAACCCAGGGCTCGGTCGGCGCGCGCAATCCGCTGCCGGCCGAGGCCATCGCTGC AGCCGATGTGGTGTTGCTGGCTGCCGATATCGAAGTACCGGCTGCGCGCTTTGCCGGCAAGCGTATCTACCGCTGCGGCACCGGCATCGCCCTCAAGCAG GCCCGTGCCACGCTGGACAAGGCCCTGGCCGAGGGCAAGGTAGAGGCGGCGGGAACGACCGGCGCGGTTTCTCCGGCCGAGAAGACCGGTGTCTACAAGC ACCTGTTGACCGGGGTTTCGTTCATGCTGCCGATGGTGGTGGCCGGCGGTTTGCTGATCGCCTTGTCGTTTGTGTTTGGCATCGAGGCCTACAAGGAACC CGGCACGCTGCCCGCCGCCTTGATGCAGATCGGCGGCGAGGCGGCGTTCAAGCTGATGGTGCCGCTGCTTGCCGGCTATATCGCCTGGTCCATTGCCGAC CGCCCGGGCCTGGCGCCCGGGATGATCGGCGGCCTGTTGGCCAGCACGCTCGGGGCGGGGTTCATCGGCGGCATCGTCGCTGGCTTCCTGGCGGGCTACA GCGCCAAGGGCATCGCCCGCTGGGTGCGCCTGCCCAGCAGCCTCGACGCGCTCAAGCCGATCCTCATCATCCCGCTGCTGGCCAGCCTGTTCACTGGCCT GGTGATGATCTACGTGGTCGGCCAGCCCGTGGCGGCCATGCTCGCGGGACTGACCCATTTCCTCGACAGCATGGGCACCGCCAACGCCGTGCTGCTTGGG CTGCTGCTCGGCGGCATGATGTGCGTCGACCTCGGCGGGCCGATCAACAAGGCCGCCTATGCCTTCTCGGTGGGGCTGCTGGCCTCGTCGAGCTACGCGC CGATGGCCGCGACCATGGCCGCCGGCATGGTGCCGCCGATCGGCCTGGGCATCGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGTGAGCGCGAGGC CGGCAAGGCGGCGCTGGCGCTGGGCCTGTGCTTCATCTCCGAGGGCGCGATCCCGTTCGCCGCCAAGGACCCGCTGCGGGTGATTCCGGCGAGCATCGCC GGGGGCGCGCTGACCGGGGCCTTGTCGATGTATTTTGGCTGCAAGCTGATGGCGCCCCATGGCGGGTTGTTCGTGCTGCTGATCCCCAACGCGATCAACC ATGCGCTGTTGTACCTGCTGGCCATCGTCGCCGGCAGCCTGCTGACGGCGGTGGTGTACGCGCTGATCAAGAAGAGCGAGCAGGTGGAGATGGTCGTGGC GCCGGCCAAGGGCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCCGCGATTGCTCCATCAAATGCTTCAACCCCTGGTCTTGCCCCGCAACGGTTTCAGCAGATCGCCCAACCCGTTGTGGTCGATCTCGTGCATCAGCGC CAGCAACCCGCCAAGCTCCCCGGGCGGGAAGCCTTTACGGGCAAACCATGCCAGGTAGTCCCCGGGCAGGTCGGCGATGATCCGCCCCTGGTACTTGCCA AAAGGCATGGTGCGGGTGACCAGCAGTTGCAGGGTTTCGGGTTTCATCGGGCGGTGGCCTGTGGCGGTTAAAGCGCGACCTTACTGCAAACTGCACGACG ACCCAAGCGGCGATCATGCAGAACGCCCTTGAACGGCATGTTTGTGAAATCTTCAAGTTACTGATTTTAATGAATTATTTTTATTTTCTGGGTTTGGCAC GAAGCCTGCTCCGATCAAGGTGACTATGACCTGCCAAGGAGTTGTTGCCATGAGTAATCCCAACAAAGACACGATCGACGTACTCAACGACCTGATCGAG
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Amino Acid Sequence |
>PTS fructose transporter subunit IIBC
MNIAIVTACPNGQVSSVLSARLLAAAAQRRGWKTCVEVHDAEHPELRLTPTQIAEADWVLVVSTGPVDLARFAGKRLYQSTPAQALADREGFLDEAAAGA QVQVTQTPVQGAPKIVAVTACPTGVAHTFMAAEALQQAAQAMGYQLTVETQGSVGARNPLPAEAIAAADVVLLAADIEVPAARFAGKRIYRCGTGIALKQ ARATLDKALAEGKVEAAGTTGAVSPAEKTGVYKHLLTGVSFMLPMVVAGGLLIALSFVFGIEAYKEPGTLPAALMQIGGEAAFKLMVPLLAGYIAWSIAD RPGLAPGMIGGLLASTLGAGFIGGIVAGFLAGYSAKGIARWVRLPSSLDALKPILIIPLLASLFTGLVMIYVVGQPVAAMLAGLTHFLDSMGTANAVLLG LLLGGMMCVDLGGPINKAAYAFSVGLLASSSYAPMAATMAAGMVPPIGLGIATFLARRKFAQSEREAGKAALALGLCFISEGAIPFAAKDPLRVIPASIA GGALTGALSMYFGCKLMAPHGGLFVLLIPNAINHALLYLLAIVAGSLLTAVVYALIKKSEQVEMVVAPAKG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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