Strain | Pseudomonas mosselii SJ10, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AAACTGACCTTCGACGACGGCCATGACTCAGGATTGTTCACCTGGGAATACCTCGAGCAGCTGTGCCTGCGCCAGGAGCAGCTATGGACCGACTACCTCG ACGAATTGCACAAAGCCGGCAAATCCCGCGACCCGTCCGAATCGGTGGTGAAATTGATGCTCTAGCTCAAGCCCCGCAAGCTTTAGAGCGCATTTTCTAA TCTCATCTGCTTGAATGCCTGGATGACGGCCAAAGATTGGCTGTCTTGCGCATTACACGAAAGTCGGGTAACCAATGGAGCTGGCAAGTTCCCTGCATCG CCTCCGGGCAGGCAGGGCCAGGCCGGTATGTAGAGGTCGCGAGCGAAAGCAGGTTGTCTTCACACGCAGAAACCCCCGCAGCTCATCATCGGCACGCATC CGGTCGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTGTCACAGCACACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG
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DNA Sequence for Gene |
>O165_RS20315
ATGAGTAACAAGAACAACGATGAGTTGCAGCGGCAGGCCTCGGAAAACACCCTGGGGCTGAACCCGGTCATCGGCATTCGCCGCAAGGATCTACTGACAT CGGCGCGCACGGTATTGCGCCAGGCCATGCGCCAGCCCTTGCACAGCGCCAAGCACGTGGCGCACTTTGGCCTGGAACTGAAGAACGTCCTGCTGGGCAA GTCGGCGCTGCAACCGGAAGGCGACGACCGTCGCTTCAGCGACCCGGCGTGGAGCAAGAACCCCCTTTATCGCCGCTACCTGCAGACCTATCTGGCCTGG CGCAAGGAACTCAACGACTGGATCAGCGAGAGCGACCTGTCGCCGCAGGACATCAGCCGCGGGCAGTTCGTCATCAACCTGGTGACCGAGGCCATGGCCC CCACCAACACCCTCTCCAACCCGGCCGCGGTCAAGCGCTTCTTCGAGACCGGCGGCAAGAGCCTGCTCGACGGCTTGTCCAACCTGGCCAAGGACATCGT CAACAACGGCGGCATGCCCAGCCAGGTGAACATGGAGGCTTTCGAGGTCGGCAAGAACCTCGGCACCAGCGAAGGCGCGGTGGTGTACCGCAACGATGTG CTGGAGCTGATCCAGTACAGCCCCATCACCGAGCAGGTGCACAGCCGCCCGCTGCTGGTAGTGCCGCCGCAGATCAACAAGTTCTACGTCTTCGACCTGA GCCCGGAAAAGAGCCTGGCGCGCTTCTGCCTGCGCTCGCAGCAACAGACTTTCATCGTCAGCTGGCGCAACCCGACCAAGGCCCAGCGCGAGTGGGGCCT GTCCACCTACATCGACGCACTCAAGGAAGCCGTCGACGCGGTACTGGCAATCACCGGCAGCAAGGACCTGAACATGCTCGGTGCCTGCTCCGGGGGTATC ACTTGCACGGCGCTGGTGGGCCACTACGCCGCCCTCGGCGAGAAAAAGGTCAATGCCCTGACCCTGCTGGTAAGCGTGCTCGACACCACCGTCGACACCC AGGTGGCATTGTTCGTCGACGAGCAGACCCTGGAGGCGGCCAAGCGTCACTCCTATCAGTCCGGCGTGCTCGAAGGTAGCGACATGGCCAAGGTGTTCGC CTGGATGCGCCCCAATGACCTGATCTGGAACTACTGGGTCAACAACTACTTGCTCGGCAACGAGCCGCCAGTGTTCGACATTCTGTTCTGGAATAACGAC ACCACCCGATTGCCGGCCGCCTTCCACGGCGACCTGATCGAAATGTTCAAGAACAACCCGCTGACCCGCTCCAATGCCCTCGAGGTGTGCGGCACCGCCA TCGACCTGAAACAGGTCGACTGCGACATCTACAGCGTTGCCGGAACCGCCGACCACATCACGCCCTGGCAGTCGTGCTACCGCTCGGCCCACCTGTTCGG CGGCAAGATCGAGTTCGTGCTGTCCAACAGTGGCCATATCCAGAGCATTCTCAACCCACCGGGCAACCCCAAGGCGCGCTTCATGACCGGCGAGGATCGC CCGGACGACCCGGTGGCCTGGCAGGAGAACGCGGTCAAGCACGCCGACTCCTGGTGGCTGCACTGGCAGGCCTGGCTGGGTGAGCGCGCCGGCGAACTCA AGAAGGCACCTACACGCCTGGGTAACCGCGCCTATACCGCAGGCGAGGCCGCACCGGGAACATACGTGCACGAGCGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGAACCGCCGTGGTGCGCCTGGTGGCGCAGCGCGGCGCTACTTTCACCACAGAGTCACGCGCATGCCGCAACCGTATATCTTCAGGACCGTCGAGCTG GACGACCAGTCCATCCGCACTGCGGTCCGCCCGGGCAAGCCTCACCTGACGCCGCTGCTGATCTTCAACGGCATCGGCGCCAACCTCGAGCTGGTGTTTC CATTCATTGAGGCCCTGGACCCGGACCTGGAGGTCATCGCCTTCGACGTGCCCGGGGTGGGCGGCTCGTCCACGCCCCGTCACCCCTACCGTTTTCCCGG CCTGGCCAAGCTGACCGCGCGCATGCTCGACTACCTGGACTACGGCCAGGTCAACGTCATCGGCGTGTCCTGGGGCGGCGCCCTGGCCCAGCAGTTCGCC CACGACTACCCCGAACGCTGCAAGAAACTGGTGCTGGCCGCCACCGCCGCCGGCGCGGTGATGGTACCGGGCAAGCCCAAGGTGTTGTGGATGATGGCCA
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Amino Acid Sequence |
>poly(R)-hydroxyalkanoic acid synthase
MSNKNNDELQRQASENTLGLNPVIGIRRKDLLTSARTVLRQAMRQPLHSAKHVAHFGLELKNVLLGKSALQPEGDDRRFSDPAWSKNPLYRRYLQTYLAW RKELNDWISESDLSPQDISRGQFVINLVTEAMAPTNTLSNPAAVKRFFETGGKSLLDGLSNLAKDIVNNGGMPSQVNMEAFEVGKNLGTSEGAVVYRNDV LELIQYSPITEQVHSRPLLVVPPQINKFYVFDLSPEKSLARFCLRSQQQTFIVSWRNPTKAQREWGLSTYIDALKEAVDAVLAITGSKDLNMLGACSGGI TCTALVGHYAALGEKKVNALTLLVSVLDTTVDTQVALFVDEQTLEAAKRHSYQSGVLEGSDMAKVFAWMRPNDLIWNYWVNNYLLGNEPPVFDILFWNND TTRLPAAFHGDLIEMFKNNPLTRSNALEVCGTAIDLKQVDCDIYSVAGTADHITPWQSCYRSAHLFGGKIEFVLSNSGHIQSILNPPGNPKARFMTGEDR PDDPVAWQENAVKHADSWWLHWQAWLGERAGELKKAPTRLGNRAYTAGEAAPGTYVHER
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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