Strain | Pseudomonas mosselii SJ10, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CTGGGTTCGCCAGCACCCGCGCCAGGCGCGGGTGCCGATCATCATGCTTACCGCCAGTTCCGATGAAGCCGACCGGGTCATCGGCCTGGAGCTGGGCGCC GATGACTACCTCGGCAAACCCTTCAGCCCGCGTGAGTTGCAGGCGCGGATCAAGGCCTTGTTGCGTCGTGCCGATTTCGGCCAGGCGGCGCCGGCCAGTG CGGTGCTGGCCTTCGATGACTGGCGCCTCGACACGATCAGCCACCGTCTGTTCCACCGCGACGGCGAAGAGGTGATCCTCTCCGGCGCCGACTTCGCCCT GCTCAAGCTGTTTCTCGATCACCCGCAGCAGATCCTCGACCGCGACACCATCGGCAACGCCACCCGTGGTCGCGAGCCGATGCCGCTGGACCGTATCGTC GACATGGCGGTCAGCCGCCTGCGCCAGCGCCTGCGCGACACGGAAAAACCACCCCGGCTGATCCGCACCGTGCGCGGCAGCGGCTACCTGCTGGCGGCCA
|
|
DNA Sequence for Gene |
>O165_RS17490
ATGTCTGCCCGGCCTGACGAGCGTCGCTGGCGCCTGCTGCCGCGCTCGCTGCTGGGGCGCATGCTGCTGCTTACCTTGCTGGTGGTGTTGCTGGCCCAGG GCCTGTCCAGCGTGATCTGGGTCGCGCAGCTGCGCGCCAGCCAGCTGCAGGGCCTGCGCGCCAGCGCCAGCAGCCTCGCGCATTCGATGAGTGCCAGTGT CAGTTACTTTCGCTCGTTGCCGGTGGCCTACCGGCCCATGGTGCTCGACCAGTTGCGCAGCATGGGCGGCACGCGTTTCTTCGTCTCGCTCAACGTCAAG CCGCTGGAAATGCCGGTGTTGCCGATCACCCCGCGCAAGCAGGCAGTGATCGACGTATTTCAGGAGGTGCTGCACGAGCGCCTTGGCCAGCAGATGGAGA TCTCCGTGGAGTTCGTCAGCCCCGACGATCTGCGCATCTTCAACAGCGGCCTGAAACTCGATGAGCTGCCCCGCTCCTGGGCGCACTATTCGCTCACCCT CGAGCCGCTCAACCCGCCGGTGCTGGTGACCCAGATCCGCCTCGGCGAGGGCGAGTGGCTGTACATCGCCTCGCTGCTGCCCGAGCCCTACACCAGCCTC GAGGCCGAACGCCTGCCGCGTCAGCAGATCGGTTTCATTGCCCTGACTACCGTGCTGTTGCTGCTGTTCATCGGCCTGCTGGTGCACTGGCAGAGTCGGC CGCTCAAGCGCCTGGCACGGGCGGCACGGGAAATGTCGCTGGGCGCCGACGTGGCCCCGGTGGCCGAAGGCGGCGGCAGCGAGGTGGTCGAGGTGGGGCG GGCGTTCAACAACATGCGCGAGCGGATCAGCCGCTACCTGACCGAGCGTTCCCAGCTGTTCAGCGCCATTTCCCACGACCTGCGCACACCGATCACGCGC CTGCGCCTGCGGGTGGAGCTGCTCGAGGACGAGAAGCTGCAGGCCAAGTTCAGCCGCGACCTCGATGAGCTGGAGCTGCTGGTCAAGGGCGCCCTGCAAT GCGTGAAGGACACCGATATCCACGAGAACATCGAGCCGATCGATCTCAACCAGGTACTGGAGATGCTGGCCGAGCCTTATCTCGGCGATGGGCGCATCAC CGTGGAGGGGCAGGCATTGGCACCGTACCCCGGAAAATCGCTGGCCTTGCGCCGCTGCATCGGCAACCTGATCGACAACGCCATCAAGTACGGCGAGCGC GCGCAGCTGCGCATCATCGATACCGCCGAGAGCTTCGTGCTGCAGGTGGACGATCAGGGGCCGGGGGTGCCGGAACAGCGCCTGGAGCAAGTGTTCGAGC CGCACTTCCGCCTCGCCGGGCAGCAGCAGGGGTATGGGCTGGGGCTGGGCATCGCGCGCAACATCGCCCATAGCCATGGCGGCGAGGTGAGCCTGTTGAA CCTGCGCGAAGGTGGGTTGCGGGTGACCTTGTACCTGCCGCGTTCAGCCGAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCCCTTGCTACGCGATAAGCGCTTCGATGTAACGATGTGGTGACAATCGAGCCGGGCTTCGTGACATGCCAGCCAGGACCGCTGGCTAGAATCGGCTGAC AACAACAAGGAAGGTGCACCCATGGCCATCAGCTGGCTTGACTCCCCGACACACCATGCCTGGCTCGACGCCGAGGCCCTGCGCCTGCTCGCCTTCGCCA GGACTTCGCGCCTGCCCCAGGGGTTCGGCAACCTCGATGACGAAGGCCGCCTGCCCCGTTGCGCCCTGGCCGAGACCATGAACACCGCGCGCATGACCCA CAGCTTTGCCCTGGCGCATATCCAGGGCGTTCCGGGTTGCCGCGAACTGGTCGGGCATGGTGTCGAGGCCCTGCAAGGCCCGTTGCGCGACAAGGAGCAT GACGGTTGGTACGCGCAGCCTGAAGGTCATGGCGACACCGGCAAGGCCGCCTACCTGCACGCCTTCGTCGCCCTCGCCGCCAGCTCGGCGGTGGTGGCGG
|
|
Amino Acid Sequence |
>histidine kinase
MSARPDERRWRLLPRSLLGRMLLLTLLVVLLAQGLSSVIWVAQLRASQLQGLRASASSLAHSMSASVSYFRSLPVAYRPMVLDQLRSMGGTRFFVSLNVK PLEMPVLPITPRKQAVIDVFQEVLHERLGQQMEISVEFVSPDDLRIFNSGLKLDELPRSWAHYSLTLEPLNPPVLVTQIRLGEGEWLYIASLLPEPYTSL EAERLPRQQIGFIALTTVLLLLFIGLLVHWQSRPLKRLARAAREMSLGADVAPVAEGGGSEVVEVGRAFNNMRERISRYLTERSQLFSAISHDLRTPITR LRLRVELLEDEKLQAKFSRDLDELELLVKGALQCVKDTDIHENIEPIDLNQVLEMLAEPYLGDGRITVEGQALAPYPGKSLALRRCIGNLIDNAIKYGER AQLRIIDTAESFVLQVDDQGPGVPEQRLEQVFEPHFRLAGQQQGYGLGLGIARNIAHSHGGEVSLLNLREGGLRVTLYLPRSAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|