Strain | Pseudomonas mosselii SJ10, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TGCCGCCACCGGTGAGACGACCCGTACTCCGTGGGGCGCCGAGGATCTGGCGCGCTTTACCCGCCTGGTACAGGACGCGGTGGGCTTCGATGCCAGCCGT GGCGACAGCGTCACCGTGATCAACGTGCCGTTCGCCGCCGACCGTGGCGACGAGCTGGTCGATATTCCGTTCTACTCGCAGCCGTGGTTCTGGGACATCG TCAAGCAGGTGCTGGGCGTGCTGTTCATCCTGGTGCTGGTGTTCGGCGTGCTGCGTCCGGTGCTCAACAACATTACAGGTGGCGGCAAGCAGGCTGCCAC GGACAGCGACATGGAGCTGGGCGGCATGATCGGTCTGGATGGCGAACTGGCCAACGACCGCGTCAGCCTGGGTGGCCCGACAAGCATTCTGTTGCCGAGC CCGAGCGAGGGTTACGAGGCACAGCTCAACGCAATCAAGGGCCTGGTGGCCGAAGACCCGGGCCGCGTGGCCCAGGTCGTGAAAGAGTGGATCAACGCCG
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DNA Sequence for Gene |
>O165_RS15090
ATGAGTGACAATCGAGCCATTACCGCCAAGCTGAGCCGCGTCGACAAGGCGGCCATCCTCCTGCTCTCGCTCGGCGAGACCGATGCCGCGCAGGTCCTGC GCCACATGGGGCCCAAGGAAGTGCAGCGGGTCGGTGTGGCCATGGCGCAGATGGGCAACGTCCATCGCGAGCAGGTCGAGCAGGTGATGAGCGAGTTCGT CGAGATCGTCGGCGACCAGACCAGCCTGGGCGTCGGCTCCGACGGCTACATCCGCAAGATGCTCAACCAGGCCCTCGGCGAGGACAAGGCCAACGGCCTG ATCGACCGCATCCTGCTCGGTGGCAACACCAGCGGCCTGGACAGCCTCAAGTGGATGGAGCCGCGCGCCGTGGCCGATGTCATCCGCTACGAGCACCCGC AGATCCAGGCCATCGTGGTCGCCTACCTCGACCCCGACCAGGCCGGCGAGGTGTTGAGCAATTTCGACCACAAGGTGCGCCTGGACATCGTCCTGCGCGT CTCGTCGCTCAATACCGTGCAGCCGGCGGCGCTCAAGGAGCTCAACCAGATCCTCGAGAAGCAGTTCTCCGGCAACTCCAATGCCGCGCGCACCACCCTG GGTGGCATCAAGCGCGCCGCCGATATCATGAACTTCCTCGACAGCTCGGTGGAAGGCGCGCTGATGGACTCGATCCGCGAGATCGACAGCGACCTGTCGG AGCAGATCGAAGACCTGATGTTCGTCTTCAACAACCTGGCCGACGTCGACGACCGTGGCATCCAGGCGCTGCTGCGCGAAGTGTCGTCCGACGTGCTGGT GGTGTCGCTCAAGGGCGCCGACGAGCGGGTCAAGGACAAGATCTTCAAGAACATGTCCAAGCGTGCATCCGAGCTGCTGCGCGACGACCTGGAGGCCAAG GGGCCGGTACGGGTCAGCGACGTGGAAACGGCGCAGAAGGAAATCCTCACCATCGCCCGCCGCATGGCCGAGGCCGGCGAGATCGTGCTTGGCGGCAAGG GCGCCGAGGAAATGATTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGGCAGGTCTCAAGCGGCAAGCGACAAGAAACGGCGGACCGAGCGAGGGCTGCCTTTTCTTGCTGCTCGAAGCTTGATGCTTGCCGCTAAAGAGGTTTT TGAGCATGTCCACCACCGAACACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGTGTCGACGTCTGGGCGCTGCCCAGCTTCGACCCGGAGCCGGA ACCCGAGCCGGAACCTGAACCTGAAGTCATCGAGGAAGAAGTCGAGGAAGTACCGCTGGAGGAAGTCCAGCCGCTGACCCTCGAGGAGCTCGAAGCCATT CGCCAGGAGGCTTACAACGAAGGCTTCGCCACCGGCGAACGCGAAGGTTTCCACAGCACCCAGCTGAAAGTGCGCCAGGAAGCCGAAGTGGCACTGGCGG CCAAGCTGGCCAGCCTCGAACAGATCATGGGGCATCTGCTCGAGCCTATCGCCGAGCAGGATACCCAGATCGAAAAGGCTTTGGTGCAACTGGTCGCCAA
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Amino Acid Sequence |
>flagellar motor switch protein FliG
MSDNRAITAKLSRVDKAAILLLSLGETDAAQVLRHMGPKEVQRVGVAMAQMGNVHREQVEQVMSEFVEIVGDQTSLGVGSDGYIRKMLNQALGEDKANGL IDRILLGGNTSGLDSLKWMEPRAVADVIRYEHPQIQAIVVAYLDPDQAGEVLSNFDHKVRLDIVLRVSSLNTVQPAALKELNQILEKQFSGNSNAARTTL GGIKRAADIMNFLDSSVEGALMDSIREIDSDLSEQIEDLMFVFNNLADVDDRGIQALLREVSSDVLVVSLKGADERVKDKIFKNMSKRASELLRDDLEAK GPVRVSDVETAQKEILTIARRMAEAGEIVLGGKGAEEMI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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