Pseudomonas mosselii SJ10, O165_RS04270
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mosselii SJ10, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GATACCAGGCATCCAGCAGCGGGCTGACTTCAATATTGGTCAGCTCGCTACGGCCCTTGAGCCAGGCTTCGACAGCGGCGCGCTGCTCTTCGGTGACAGA GCCACGCTTGACGGAGCAGACCAGGCCGAAGTCATCACCGCCAACATAGTCCAGGCCGTTGGCATCCATGGCATCAGCCAGGAAAGCATCGAGGAAGGCA TCGATGGCTTCATCGGACAGGTCTTCCTTGAAGCCCAGGTTCAGTTCGAAACCCAGCTCCTGGAATTCATCCACGCACAGTTTCTTGCGCAGGCGACGGG AACGGTTGGTAGCCATGAAACAATCCTCTCAATTAATTACGCGCGGCACTTTACCAGTTTCCGGCGCACAACGGCGCTTTTCCGTCGAACGAGGCCCATA CAGAGCACGCTTGGGGCATAATGCGCACTATATTCGTCCTGGGGCCATCATTCATACAGCCCCATTGTCTTTTCCCCTCGCCTGCAGGGTTTGTCCATTT
|
|
| DNA Sequence for Gene |
>O165_RS04270
ATGATCAAGACGCTCCGCCCACTGTTGTTCGCCGGCCTGTTGCTGCCCTTGTCGCTGTCAGTCCAGGCCGCCACCGTAAACACCAACCTGTCACCGAAGG TGCAACAGGCGCTCAAAACCAACAAGCTGCAGGACTCGGCCCTGTCGCTGGTCATGCTGCCGCTGGACGGACCAGGCGCGGCAACCGTTTTCAACGCCGA CGTTTCGGTCAACCCGGCCTCGACCATGAAGCTGGTCACCACCTATGCCGCGCTTGAGCTGCTGGGCCCCACCTTTCAATGGAAAACCGAGTTCTACACC GACGGCACACTGAGCAACGGCGTGCTCAATGGCAACCTGTATCTCAAGGGCGGTGGCGACCCCAAGCTGAACATGGAAAAGCTCTGGTTGCTGATGCGCG ACCTGCGCGCCAACGGTGTGCGTACCGTGACCGGCGACCTGATCCTGGATCGCAGCCACTTCGTGCAACCCAACCTGCCGCAGTTCAACGATGACGGCGG CGACGACAACAAACCGTTTCTGGTCAAGCCGGACTCGCTGCTGGTCAACCTGAAGGCTCTGCGTTTCGTGGCCCGTAACGACGGTGGCAAGGTCAACGTG TCGGTCGAACCACCGATCGCCAGCATCCGCATCGACAACCAGGTCAAGGCAGTGGCGGGCAAGCAGTGCACTGGCGAAGTGCGCTACAACCCGGTAGTGC AGCCCGATGGTGTCAGCGTCACGGTCAGTGGCCAGCTCGCCGATGGCTGCAACTCGCAGACCTACCTGGCGCTGCTGGATCACCCGACCTATGCCGCCGG TGCGGTGCGGGCCATCTGGAACGAGCTGGGCGGCAACATCCAGGGCCGCGACCGCATCGAGAACGTGCCCAAAAGCGCACGCTTGCTGGCCCGTGCCTTC TCGCCAGACCTGGTGGAAGTGATCCGCGACATCAACAAGTACAGCAACAACACCATGGCCCAGCAGTTGTTCCTGAGCCTTGGCGCACAGTTCCGCACCG ACGCCGACGGCGACGACGCCCGTGCCGCCCAACGCGTGGTACGCCAGTGGATGGCCAAGAAAGGCATCACCGCGCCGCACCTGGTGATGGAGAACGGCTC GGGCCTGTCCCGTGCCGAGCGGGTCAGCACCCGTGAGATGGCTGCGCTGCTGCAGGCGGCCTGGAAAAGCCCGTACGCGGCCGAGTTCATCAGTTCGATG CCGCTGGTGGGCATGGACGGCACCATGCGCAAGCGGCTCAAGCGTACCGCCATGACGGGCGAAGGGCATATCAAGACCGGGACCCTGAACACCGTACGGG CGATTGCCGGGTTCAGCCGTGACAGTAACGGGCACACCTGGGCGGTGGCGGCCATTCTCAATGATCCCAAGCCTTGGGGGGCTTCGCAGGTGCTGGATCA GGTGTTGCTGGATCTTTATCGGCAGCCGAAGGTGGGGAATGGGACTGTTGGGGTGATGCCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGGGCTTGGGTCCTCAAAGTGTAGGTTTTGATTGATGTAAGCACATGCATTGGCGAGGGCGACGCGTAGTCACCTTTTCGCCGTTACGGCGACCTTCTT TTGCGCGGGCAAAAGAAGGCAAAAACCGCTGGCTCCATTCATCCGGCCCCTACGCTTCGCTTCGGGGTCCCCTCACTCCGGGCTCGCTCCGGGAGGACGC GCCGACGGGCCATCCATGGCCTGATCGGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAACCCTGCGTTCGGCCTCCTGAAGTCGCAATTGG CGGCGCCTGGGCTATTGCGCGCTTAGAAGCAGAGCAAGAGCAAGACGAAAAAGCACAAATGCTTGTTTGGCAGCTGATCATTGACTGGCTGTCGCATCGG TGCGCCGATGCGACTTGCCGTGATCTCGTAGGCGGGGCTCAGCGTGCGGGGGCGAGCTTGCCCTTGTCGTCGGAGAAGACGATCTCTACCCGACGATTCT
|
|
| Amino Acid Sequence |
>D-alanyl-D-alanine carboxypeptidase
MIKTLRPLLFAGLLLPLSLSVQAATVNTNLSPKVQQALKTNKLQDSALSLVMLPLDGPGAATVFNADVSVNPASTMKLVTTYAALELLGPTFQWKTEFYT DGTLSNGVLNGNLYLKGGGDPKLNMEKLWLLMRDLRANGVRTVTGDLILDRSHFVQPNLPQFNDDGGDDNKPFLVKPDSLLVNLKALRFVARNDGGKVNV SVEPPIASIRIDNQVKAVAGKQCTGEVRYNPVVQPDGVSVTVSGQLADGCNSQTYLALLDHPTYAAGAVRAIWNELGGNIQGRDRIENVPKSARLLARAF SPDLVEVIRDINKYSNNTMAQQLFLSLGAQFRTDADGDDARAAQRVVRQWMAKKGITAPHLVMENGSGLSRAERVSTREMAALLQAAWKSPYAAEFISSM PLVGMDGTMRKRLKRTAMTGEGHIKTGTLNTVRAIAGFSRDSNGHTWAVAAILNDPKPWGASQVLDQVLLDLYRQPKVGNGTVGVMP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|