Pseudomonas aeruginosa VRFPA04, P797_RS29460
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa VRFPA04, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGAAGCCCGGCGAACGCCGGGCTTCTTCATTTCTGTCCTTGTGCTTTTTTCGTTCTTTGATGAGAGCGGAAAATTATTTTTACTTATAAATAAAAAAA GCACCTACACCGAAATACTGAAACACTTCTCTGGCAAACCGTGGCGGTTTTTCGGCGGACCGCCAACAAGCTGGCGAGCCCCCCTCCAAAAGTCAGAATA CCGTCTCGCGAAATTCATTGATCGGCATCAACGATCCGGCTTGATCCGTGGCTTATAGCCCGATTTCGAGCAATTTCAAGCTTTCCCCGTAGCGGATGGC AAGACTTCCCCTATCACATGAAAAAAACCGCCCTATTCCGGGCAGGTCTTAGATTCCTCTTCTATCTTTGGCACTCGCGACTTACAGGAATGCGTCATCT AATTACTTTGAGTAGGAAGCTATTGACGTGGATCAGCATTCAACAATAGCCGCTGCCGCCTAATGGCTTCACTCTCAATTCCTATAGGGAGATTCCGAAA
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| DNA Sequence for Gene |
>P797_RS29460
ATGTCCCAAGAATCCAGCCAAAAACTCCGACTAGGAGCGCTAACGGCTCTGGTTGTCGGCTCGATGATCGGAGGGGGCATCTTCTCCCTTCCGCAAAACA TGGCAGCCAGCGCCGACGTCGGCGCCGTCCTGATCGGATGGGCGATCACCGCCGTCGGCATGCTCACCCTCGCTTTCGTCTTCCAGACCCTCGCCAACCG CAAGCCCGAACTCGACGGCGGCGTGTACGCCTACGCCAAGGCCGGCTTCGGCGACTACATGGGTTTCTCCTCGGCCTGGGGCTACTGGATCAGCGCCTGG CTGGGCAACGTCGGCTACTTCGTCCTGTTGTTCAGCACCCTCGGCTACTTCTTCCCGATCTTCGGCAAGGGCGACACCGTCGCCGCGATCGTCTGCGCCT CGGTCCTGCTCTGGGCCCTGCACTTCCTGGTGCTGCGCGGGATCAAGGAAGCGGCGTTCATCAACACCGTCACCACCGTGGCCAAGATCGTGCCGCTGTT CCTGTTCATCCTGATCTGCCTGTTCGCCTTCAAGCTGGACATCTTCACCGCCGACATCTGGGGCAAGAGCAACCCGGACCTGGGCAGCGTGATGAACCAG GTGCGCAACATGATGCTGGTCACCGTCTGGGTGTTCATCGGCATCGAGGGCGCGAGCATCTTCTCCTCCCGCGCGGAAAAACGTTCCGACGTCGGCAAGG CCACCGTGATCGGCTTCATCACCGTCCTGCTCCTGCTGGTGCTGGTCAACGTGCTGTCCATGGGCGTGATGACCCAGCCGGAACTGGCCAAGCTGCAGAA CCCGTCGATGGCGCTGGTACTCGAGCATGTGGTCGGCCACTGGGGCGCCGTGCTGATCAGCGTCGGCCTGCTGATCTCGCTGCTGGGCGCGCTGCTCTCC TGGGTGCTGCTGTGCGCCGAGATCATGTTCGCCGCGGCCAAGGACCACACCATGCCGGAGTTCCTGCGCCGCGAGAACGCCAACCAGGTGCCGGCCAACG CCCTGTGGCTGACCAACATCTGCGTACAGGTGTTCCTGGTGGTGGTGTTCTTCACCTCGGGCGACCCGGACGGCATGGACCCGTACACCAAGATGCTGCT CCTGGCCACCTCGATGATCCTGATCCCGTACTTCTGGTCCGCCGCCTATGGCCTGCTGCTGACCCTGAAGGGCGAGACCTACGAGAACGATGCCCGCGAA CGCAGCAAGGACCTGGTCATCGCCGGCATCGCTGTGGTCTACGCGGTCTGGCTGCTCTACGCCGGTGGCCTGAAGTACCTGCTGCTGTCCGCCCTGCTGT ATGCGCCCGGCGCGATCCTCTTCGCCAAGGCCAAGCACGAGGTCGGCCAGCCGATCTTCACCGGAATCGAAAAACTGATCTTCGCCGCAGTCGTCATTGG CGCCCTGGTGGCTGCCTACGGCCTCTACGACGGTTTCCTCACCCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTACTCCACTGGAGACGTGAAATGAGCACGGAAAAAACCAAACTTGGCGTCCACTCCGAAGCCGGCAAACTGCGCAAAGTGATGGTCTGCTCGCCCGGAC TCGCCCACCAGCGCCTGACCCCTAGCAACTGCGACGAGTTGCTGTTCGACGACGTGATCTGGGTGAACCAGGCCAAGCGCGACCACTTCGACTTCGTCAC CAAGATGCGCGAGCGCGGCATCGACGTCCTCGAGATGCACAACCTGCTGACCGAGACCATCCAGAACCCGGAAGCGCTGAAGTGGATCCTCGATCGCAAG ATCACCGCCGACAGCGTCGGCCTGGGCCTGACCAGCGAGCTGCGCTCCTGGCTGGAGAGCCTGGAGCCGCGCAAGCTGGCCGAGTACCTGATCGGCGGCG TCGCCGCTGACGACCTGCCCGCCAGCGAAGGCGCCAACATCCTCAAGATGTACCGCGAGTACCTGGGCCATTCCAGCTTCCTGCTGCCGCCGTTGCCGAA
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| Amino Acid Sequence |
>amino acid APC transporter
MSQESSQKLRLGALTALVVGSMIGGGIFSLPQNMAASADVGAVLIGWAITAVGMLTLAFVFQTLANRKPELDGGVYAYAKAGFGDYMGFSSAWGYWISAW LGNVGYFVLLFSTLGYFFPIFGKGDTVAAIVCASVLLWALHFLVLRGIKEAAFINTVTTVAKIVPLFLFILICLFAFKLDIFTADIWGKSNPDLGSVMNQ VRNMMLVTVWVFIGIEGASIFSSRAEKRSDVGKATVIGFITVLLLLVLVNVLSMGVMTQPELAKLQNPSMALVLEHVVGHWGAVLISVGLLISLLGALLS WVLLCAEIMFAAAKDHTMPEFLRRENANQVPANALWLTNICVQVFLVVVFFTSGDPDGMDPYTKMLLLATSMILIPYFWSAAYGLLLTLKGETYENDARE RSKDLVIAGIAVVYAVWLLYAGGLKYLLLSALLYAPGAILFAKAKHEVGQPIFTGIEKLIFAAVVIGALVAAYGLYDGFLTL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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