Pseudomonas aeruginosa VRFPA04, P797_RS21590
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa VRFPA04, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGTGTCGTAGACCGCGATGTCGCCGTGCGGGTGGTACTTACCGATCACGTCGCCGACCACACGGGCGGATTTCTTGTAGGGCTTGTTCCAGTCGTTGCCC AGCTCGCTCATGGCATAAAGCACACGGCGGTGCACCGGCTTCAGGCCGTCACGTGCATCCGGCAGGGCCCGCCCGACGATCACGCTCATCGCGTAGTCGA GATAGGACTGTTTCAGCTCGTCTTCGATATTGACCGGGAGAATTTCTTTGGCCAGTTCGCCCATGAGAAGCCTGGTTCCTTTTTCTGGTGGAACTTCGCC GCCTCGATCCTGAGGCAAACGAAGTAGGTCGGCGCATGCCCGAGCAGCGCCAACTCACTACAAATCAACGACTTGAGTCAAGGATTCGCGCACTCTCGAG GCCCCTCCGCGGGGCGCTCGAATAACCGTCGGAGCTTACCACAGCCCACGCCCCAGCCCAAGGCAAAGGCCCTGGCGGGGACGACCTCCAGTCGCCTCGT
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| DNA Sequence for Gene |
>P797_RS21590
ATGCGAGAGCGACTGCTGGCGGCCGAGCGGGTCAAGGCGATCGAGTGGCGGGACGGTACGCTGCGGTTGCTGGATCAGCGCCTGCTGCCCCAGGAGGAGG TCTGGCTCGAACATGAGTCGGCGGCCGAGGTGGCCAAGGCCATTCGCGATATGGTCGTGCGCGGCGCGCCGGCCATCGGCATCAGCGCCGCCTACGGCAT CGTCCTTGGCGCCCGCGCGCGCCTGGCGCAGGGCGGCGACTGGCGCGCCGCGCTGGAGGAGGACTTCCGCCTGCTGGCCGACTCGCGACCCACGGCGGTC AACCTGTTCTGGGCGCTGAACCGCATGCGCGACCGTCTGGAGCGAATGAAAGAGGGCGACCAGCCGCTGGCGGTGCTGGAAGCCGAGGCGATCTCCATCC ATGAAAGCGACCGCGAGGCCAACCTGACCATGGCCCAGTTGGGCATGGAGCTGATCCGCAAGCAGCAGGGCAGCCCGCAGAACATCCTCACCCACTGCAA TACCGGCGCCCTGGCGACCGGCGGGTTCGGCACCGCGCTGGGGGTGATCCGCGCCGCGCACCTGGAAGGCCTGGTCAATCGCATCTACGCCGACGAAACC CGGCCCTGGCTCCAGGGCTCGCGACTGACCGCCTGGGAGTTGGCCAACGAAGGCATCCCGGTCAGCCTGAACGTGGATTCGGCCGCCGCGCACCTGATGA AGACCGAGAACATCACCTGGGTCATCGTCGGCGCCGACCGCATCACCGCCAATGGCGATGTCGCCAACAAGATCGGCACCTACCAGTTGGCAGTCAACGC CATGCACCACGGCGTGCGCTTCATGGTGGTGGCGCCGAGTTCGACCATCGACATGAACCTGGAGAGCGGCGAGGACATCCCGATCGAAGAGCGCGACGGT CGCGAACTGCTGGAAATCGGCGGGCGACGGGTGGCGGCCGAGGTCGATGCCTACAATCCGGTATTCGACGTGACCCCGGCGGACCTTATCGATGCCATCG TGACCGAGCGTGGCGTCGTCGAGCGTCCCGACGCCGAGCGCATGGCCGCCCTGATGAGCCGCAAGCGCCTGCATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCACACACCTCTCGCTGAATCACGGAAAAGCTGCGGATTATAACGAGCCCCAGCCGCGGACGCTCGGGTATACTTCCGGCTTCCCGCTCTGCGCCCAGGA TGCGCCGCCATGCCCAACGTCCGTAACCCCTTCGACCTCCTCCTGCTGCCGACCTGGATCGTCCCCGTGGAGCCCGCCGGGGTGGTGCTGCGCGATCACG CGCTGGGCATCCGCGACGGCCAGATCGCCCTGGTCGCGCCGCGCGAGCAGGCCATGCGCCATGGCGCCACGGAAATCCGCGAATTGCCCAGCATGCTGCT CGCCCCCGGCCTGGTCAACGCCCACGGCCATTCGGCAATGAGTCTGTTCCGCGGTCTCGCCGACGACCTGCCGCTGATGACCTGGCTGCAGGACCACATC TGGCCGGCCGAAGGCCAATGGGTCAGCGAGGACTTCATCCGCGACGGCACGGAGCTGGCCATCGCCGAACAGGTAAAGGGCGGCATCACCTGTTTCTCCG
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| Amino Acid Sequence |
>methylthioribose-1-phosphate isomerase
MRERLLAAERVKAIEWRDGTLRLLDQRLLPQEEVWLEHESAAEVAKAIRDMVVRGAPAIGISAAYGIVLGARARLAQGGDWRAALEEDFRLLADSRPTAV NLFWALNRMRDRLERMKEGDQPLAVLEAEAISIHESDREANLTMAQLGMELIRKQQGSPQNILTHCNTGALATGGFGTALGVIRAAHLEGLVNRIYADET RPWLQGSRLTAWELANEGIPVSLNVDSAAAHLMKTENITWVIVGADRITANGDVANKIGTYQLAVNAMHHGVRFMVVAPSSTIDMNLESGEDIPIEERDG RELLEIGGRRVAAEVDAYNPVFDVTPADLIDAIVTERGVVERPDAERMAALMSRKRLH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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