Strain | Pseudomonas aeruginosa VRFPA04, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GCACGGCGCCGGTAGCGGCATCCAGCTCCAGGTCCCATTTCACGCCCTGCGGGTCGCGCAACTCGACCTGGTAGATGTAGCGGCCGTATTCCTCTTCCAG CTCGGTATCGTGGACGCTCGAGCCGGGATGCTTGGCGATGGCGTTCTTGTTCAGCTCTTCGAAGGACTTGATGGTGCCGGCGTCACGCAGCTTCAGCGCC TCGTCCGGGCCGAGGTCGCGGGCCTGGGCCAGGCCGGCAGTCAGGGTGATGGCGGTGGCGGCGAACAGGGCAGTCAGTTTCTTCATGGGAATCTCTCCGT GGGAATCAATCGTGTTGCTTTCGACGGTTTGCAGATTAACCGGGCGCTCTTAATTGAAGCTGAATTTGCCGCAAGGACATGGCCGGGGCGCGCCATAGGG TAACGGAAAGCCTCTGCGATGGGGCTCGCCGGCGTTCGAAAGCGCTTGGTCCTGCGACAACTCGTCCTATAATCGCCGGTCCGCAAGGGAGAAGACCAGC
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DNA Sequence for Gene |
>P797_RS19015
ATGCCAGCCATCCAGATCAAGTCCCCCGCACTGACCCTCAAGGCCGGTCGCCGCGCCCTCGCCCGCATCCGCGAGCGCGGCCTGCAGCCGACCGACGTCG GCATCGTCCCCGGTGCCGCCGGCGGGCCAAAGGCGCTGGGCATCCAGGGACTGGACCTGGCGATCTTCGGCGAGTGGCTGCCGCGCGCCCCGCGCGAACG CTCGCTGATCGGCGCCTCCATCGGTTCCTGGCGCTTCGCCAGCGCCTGCCTGCCCGACGCCGTGGCCGGCCTCACCCGCCTCGGCGAGCTGTACACCCGG CAGCGTTTTCCCAAAGGCGTGAGCATCGCCGAAGTCTCGCGCAAGTGCGCGGCGATGCTCGACGACCTGCTCGCCGGCCAGGACGCGCGGATCCTCGACA ACCCGCTGTACCGCCTCAACGTGGTGGTGGTGAAGAGCCACGGGCGCCTCGCCCACGACCACAAGGCCAGCCTCGGCCTGGGGCTGTCCTCGGTGATCCG CGACAACCTGATCGGCCGCCGCCACCTGCACCGCCACTTCGAACGGGTGATCCTGCATGACGCCCGCCAGGCGCCGCCGCTGGCCGCGCTGACCGACTTC CCGTCGCGCTACCTGCACCTGGACGGCGGCAACCTGCGCCAGGCGCTGCTCGCCTCCGGCTCGATCCCGATGGTCATGGAAGGCGTCCGCGACCTGCCTG GCGCCGGCCCCGGCACCTACCGCGACGGCGGCCTGCTCGACTACCATCTCGACCTGCCCTACGAGGACCGCGGCGTGGTGCTCTACCCGCACTTCACCGA CAAGGTGATCCCCGGCTGGTTCGACAAGGGCTTGCCCTGGCGCCGTGGCGACGCCGGGCGCCTGCAGGACGTGCTGCTGCTGGCTCCGTCGCGCGAGTAC CTGGCGCGCCTGCCGCACGCCAAGCTGCCGGACCGCAAGGACTTCACCCGCTACCTCGGCGACGACGACGGCCGCGAGTGCTACTGGCGCCAGGCGATGG CGGAAAGCCGCAGGCTCGGCGACGAATTCCTCGAACTGGTCGACGGCGGCCGGCTCGGCGAACGCCTGCAAGCGCTGGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGCCACCGACAGAAGGATCCTGCATGAAACTGGCCGTAGCGCTGATCCACGGCATCGGCGACCAGCCCGATAGCCGCGACGAGGACGGTCTGCACAGC TACGCCCGCGAACTGGTAGCGGCGCTGCGCCGACGTCTCGGCGCGGAAGCCGGCGAGGTGGCCTTCCAGAGCCTGTACTGGGCCAGCGTGCTGGACGCCC GCGAACTGGACTACCTCAAGCGCATCGAGCGCGAGCCGCTGGGCTGGCGCTGGCTGCGCCGGGCGGTGACGCTGTTCCTCGGCGACGCCAGCGGCTACCG CAAGGTCAGCGCCGCCTACGACACCACCTACCAGCAGGTCCACCAGCACGTGCGCAGCGGGATCATGGCCCTGCGCGCGAAGGTCGGGCCGCAGACGCCG CTGGTGATCCTCGCCCACTCCCTGGGCGGGCACATCGTATCCAACTTCATCTGGGACCAGCAGAAACTCAACCGCACGCCGAGTTGCTCGATCGACCCCT
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Amino Acid Sequence |
>hypothetical protein
MPAIQIKSPALTLKAGRRALARIRERGLQPTDVGIVPGAAGGPKALGIQGLDLAIFGEWLPRAPRERSLIGASIGSWRFASACLPDAVAGLTRLGELYTR QRFPKGVSIAEVSRKCAAMLDDLLAGQDARILDNPLYRLNVVVVKSHGRLAHDHKASLGLGLSSVIRDNLIGRRHLHRHFERVILHDARQAPPLAALTDF PSRYLHLDGGNLRQALLASGSIPMVMEGVRDLPGAGPGTYRDGGLLDYHLDLPYEDRGVVLYPHFTDKVIPGWFDKGLPWRRGDAGRLQDVLLLAPSREY LARLPHAKLPDRKDFTRYLGDDDGRECYWRQAMAESRRLGDEFLELVDGGRLGERLQALD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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