Pseudomonas aeruginosa VRFPA04, P797_RS18505
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa VRFPA04, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGGTTGTTGCGCCAGGGTTTCAATCGCGGCCTGTACTGGGCCGTAGCCCGTGGAATGCTTTGACCCCGCACGGGGAGGAGCCGACATGGATAGCCATCAG CAGCCATACGCGTCGCAGGCGCAGGCCGATACCACCCTGTTTCCCGAGCAGACCCGCGAGAGTCTCCAGGCCCTGGCCGTCAAGTTGCAGCCGCTGATCG AGGGCCACCGCCTGGACAACCTGGTGGATCTGCTGTCACTGCTTTCGGATATCGTCGATCTGCTGGACCCGGCCATGGTGGACAGGCTGGCGCAGCTCTT CGAGCAGGTCACCAGTGTCGGTTGGTCAGTCGGTAACGCGGTACGCGTGGCCAAGGCGGAGCTGCTCCGAGAGCAGCCGCCAAGCCTGAAAGACCTGCTG CGGTTGTTGCGCGACGCCGATACCCGGCGCGGGCTGGCTCTCGTGCTGGGTAGCTTGCGCAGCCTGGGGTGCCAACTCGCCGCGGAGCAGGAGGTTGCCC
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| DNA Sequence for Gene |
>P797_RS18505
ATGGTGCATGACCTTCTCCGAGATCGTGCGGATCTAGAGGCGCGTTGGAACCCTTCCGCCTACATGCAGTTCGCCCGATTGCGCCAGCGGCCGGTGGTCG AGTTGCTGGACCATATCGAGCTGTGCTGTCCGGAACGGATCTACGATCTTGGCTGCGGAACCGGCATCGCCACCGAATTGCTCGCCCGCCGCTGGCCGCT GGCCGAACTGCACGGCGTGGACAGCTCCGTGGAGATGCTCGAGGAGGCCGCGCGCTTGCCGATCAAGGCCAGTTGGGAACGCGCCAACCTGCGCCACTGG TGCGCCGAGCGCCCTGCCAGCCTGCTGTTCGCAGCGGCGGTACTGCACTTTCTCGAAGATCACGGCAAGCTGCTGCCACGCCTGCTGGGGCAACTGGCTC CGGGAGGCTGCCTGGCGGCGCACATGCCGAACTGGCGCGATGCTTCCTGGTATCGCCTGATGCTCGATGCGCTGGACAGTGCGGGCCCCGGCGGTGCATC GCTGGGCAGCCCCGCGTTGCGCTATAGGCTGCATCGGCGCAATGTGCTGTCGCTGGACAACTACTACCGGCTACTGGCACCGCTGACGGCGGAGCTGGAC ATCTGGGAGACCGAGTACCTGCAAGTGGTGGACGGCAACGACCCGATCTTCGATTGGATCAAGGTCTCCGCCTTGCGTCCGGTGCTCGGCGAACTGGACG AGGAGGCGCGTCGGCGCTTCCTCGACCGTTACCTGGAACTGCTGCACCGTCACTATCCACGGGAACTGGATGGACGAACGCTGTTCCCGTTCCGCCGAGT ATTCATCGTCGCCAGTCTCGGCCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGGGCGTTTCAGTGATCGGAGAGAATGTCCACTGCGCCCGGCTTGTCGTAGGCGCCGAAGCGATCGACCAGGGTCGCGCTGGCGGCGTTCAGGCCCAGC ACGTCGACCTGCACGCCGCGCTGGCGAAAGCTCAGGACCACCTTGTCCAGTGCCGCGACGGCGGTGACGTCCCACAGGTGGGCGTGGCGCAGGTCGATGA GCACATGCTCCAGCGTCTCTTTCAGGTCGAAGGCAGCGACGAACTTGCCGGACGACGCGAAGAACACCTGCCCGCTCACCTGGTAGTGGCGGCGGGTGCC GTCGGCGGAGCGTTCGCTGTCGATATCGAGGTAGTGCCCGATCTTGTTGGCGAAGAACAGCGAGGCCAGGAGAACGCCGGCGACCACGCCGAAGGCCAGG TTGTGGGTGGCGAGGACCACGCCGACCGTCACCAGCATGACCAGGTTGGTCGATAGCGGGTAGCGCTTCAGGTTGCGGATCGACTCCCAGCGGAAGGTGC
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| Amino Acid Sequence |
>trans-aconitate 2-methyltransferase
MVHDLLRDRADLEARWNPSAYMQFARLRQRPVVELLDHIELCCPERIYDLGCGTGIATELLARRWPLAELHGVDSSVEMLEEAARLPIKASWERANLRHW CAERPASLLFAAAVLHFLEDHGKLLPRLLGQLAPGGCLAAHMPNWRDASWYRLMLDALDSAGPGGASLGSPALRYRLHRRNVLSLDNYYRLLAPLTAELD IWETEYLQVVDGNDPIFDWIKVSALRPVLGELDEEARRRFLDRYLELLHRHYPRELDGRTLFPFRRVFIVASLGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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