Strain | Pseudomonas aeruginosa VRFPA04, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
ACTCACGCACAGAAGACCCACACTTTATCCACAGGTTTCCCCCAGACTGTCACCTTGCAAACACCCCATTAGCGCATTATCTTGTATCCCCATCGTCGCC ACCCCCTATATCTTGGGTTTCGAGCGCACGAACGGCTACAACGGAACCAACCGCGCACGGACCACTCTGATGGCTCCGGCGGCTCCGCAAAAAAGCATTT TCCAGACGTACTGAAAGCATCGACGGCGCTCACCGCAAGGAGCCCTTCATGACGTTGGAAAAGCGGTACGGGTGTTGCAACGGACGCTGTAAACAGACAG TCAACACCACTAGGTATTGTGTTCGACGGCAAAACGCCACGAACCCGCCAGGGCCAGGGAGGCACTCACAGTCCCCACCCTCAGCATTCGAATGAAGCAG CCGCCGCGAGGCCGGCTGCCCGGCTCTTTATCGATTCAAGGGAATGGGCGCCCCGGCGCCCGCTAGCAAAACCATTACGAGAACGTGGAGATACCCACCC
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DNA Sequence for Gene |
>P797_RS11160
ATGCATACCGACACCACACGCGAGAACCCGCAGGCCAGCGCGCCGCAGGCCGCCGATTCGTCGCAGGATCTGGCCGCCACCGCGCCGGGCCAGCTACGCG TGATCAAGCGCAACGGCACCGTAGTCCCCTACACCGATGACAAGATCACCGTGGCCATCACCAAGGCGTTCCTCGCCGTGGAAGGCGGCACCGCCGCCGC CTCGTCGCGTATCCATGACACCGTGCGCCGCCTGACCGAGCAGGTCACCGCCACCTTCAAGCGCCGCATGCCGTCCGGCGGCACCATCCACATCGAAGAG ATCCAGGACCAGGTCGAACTGGCCCTGATGCGCGCCGGCGAGCAGAAGGTCGCCCGCGACTACGTGATCTACCGCGAAGCCCGCGCCGCCGAGCGCAAGA ACGCCGGCGCCGCCAGCGATGTCGCCCAGCCGCACCCGAGCATCCGCATCACCCGCGCCGACGGCAGCCTGTCGCCGCTGGACATGGGCCGCCTGAACAC CATCATCAGCGAAGCCTGCGAAGGCCTGGCCGAGGTGGACGGCGCGCTGATCGAGCGCGAGACCCTGAAGAACCTCTACGATGGCGTCGCCGAAAAGGAC GTCAACACCGCCCTGGTGATGACCGCGCGCACCCTGGTCGAGCGCGAGCCGAACTACTCCTACGTCACCGCCCGCCTGCTGATGGACACCCTGCGCGCCG AAGCCCTGGGCTTCCTCGGCGTGGCCGAGAGCGCCACCCATCACGAAATGGCCGAGCTGTACGCCAAGGCCCTGCCGGCCTACATCGAGAAAGGCGCCGA GTTCGAGCTGGTCGATGCCAAGCTGAAGGAATTCGACCTGGAGAAACTGGGCAAGGCCATCGATCACGAGCGCGACCAGCAGTTCACCTACCTCGGCCTG CAGACCCTGTACGACCGCTACTTCATCCACAAGGACGGCATCCGCTTCGAACTGCCGCAGATCTTCTTCATGCGCGTGGCCATGGGCCTGGCCATCGAGG AGAAGGACCGCGAGGCACGCGCCATCGAGTTCTACAACCTGCTGTCGTCCTTCGACTACATGAGTTCCACCCCCACCCTGTTCAACGCCGGCACCCTGCG TCCGCAGCTCTCCAGCTGCTACCTGACCACCGTGCCGGACGACCTGTCGGGCATCTACGGCGCCATCCACGACAACGCCATGCTGTCGAAATTCGCCGGC GGCCTGGGCAACGACTGGACCCCGGTGCGCGCGCTGGGCTCCTACATCAAGGGCACCAACGGCAAGTCCCAGGGCGTCGTGCCCTTCCTGAAAGTGGTCA ACGACACCGCGGTCGCGGTCAACCAGGGCGGCAAGCGCAAGGGCGCGGTCTGCGCCTACCTGGAGACCTGGCACCTGGACATCGAGGAATTCCTCGAGCT GCGCAAGAACACCGGTGACGACCGTCGTCGTACCCACGACATGAACACCGCCAACTGGATCCCCGACCTGTTCATGAAGCGCGTCTTCGACGACGGCTCC TGGACCCTCTTCTCGCCGTCCGACGTCCCCGACCTGCACGACCTCTACGGCAAGGCCTTCGAGGAGCGCTACGAGTACTACGAGGCCCTGGCCAGCTACG GCAAGCTGAAGCTGCACAAGGTCGTCCAGGCCAAGGACCTGTGGCGCAAGATGCTCTCCATGCTGTTCGAGACCGGCCACCCGTGGCTGACCTTCAAGGA CCCGTGCAACCTGCGCAGCCCGCAGCAGCACGTGGGCGTGGTGCACAGCTCGAACCTCTGCACCGAGATCACCCTGAACACCAACAAGGACGAGATCGCC GTCTGCAACCTGGGCTCGATCAACCTGGTCAACCACATCGTCGACGGCAAGCTGGACACCGCCAAGCTGGAGAAGACCGTCAAGACCGCGGTACGCATGC TCGATAACGTCATCGACATCAACTACTACTCGGTCCCGCAGGCGCAGAACTCCAACTTCAAGCACCGTCCGGTCGGCCTGGGCATCATGGGCTTCCAGGA CGCCCTGTACCTGCAGCACATCCCCTACGGTTCGGACGCGGCCATCGCCTTCGCCGACCAGTCCATGGAAGCCATCAGCTACTACGCGATCCAGGCTTCC TGCGACCTGGCCGACGAGCGCGGCGCCTACCAGACCTTCCAGGGCTCGCTGTGGTCGCAAGGCATCCTGCCGATCGACTCGGAGAAGAAGCTGATCGAAG AGCGCGGCGCCAAGTACATCGAAGTCGACCTGTCGGAAACCCTCGACTGGGCACCGCTGCGCGAGCGCGTACAGAAAGGCATCCGCAACTCGAACATCAT GGCCATCGCGCCGACCGCGACCATCGCCAACATCACCGGCGTCTCGCAGTCGATCGAGCCGACCTACCAGAACCTGTACGTGAAGTCGAACCTCTCCGGC GAGTTCACCGTGATCAACCCCTACCTGGTGCGCGACCTCAAGGCCCGCGGCCTGTGGGACCCGGTCATGGTCAACGACCTGAAGTACTACGACGGTTCCG TGCAGCAGATCGAGCGCATCCCGCAGGACCTCAAGGACCTCTACGCCACCGCGTTCGAAGTCGAGACCCGCTGGATCGTCGAAGCCGCCAGCCGTCGCCA GAAGTGGATCGACCAGGCCCAGTCGCTGAACCTGTACATCGCCGGCGCCTCGGGCAAGAAGCTCGACGTGACCTACCGCATGGCCTGGTTCCGCGGCCTG AAGACCACCTACTACCTCCGTGCCCTGGCCGCCACCAGCACCGAGAAGTCCACCATCAACACCGGCAAGCTCAACGCCGTGTCGGCCGGTGGCAACGACG GCCTGCAAGCCGCCCCGGCCGCCGAGCCGAAGCCGGCGCCGGTGCCGCAGGCATGCAGCATCGACAACCCCGACTGCGAAGCCTGCCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGCGCGTCGCTGAACGGCGTCCGTGTCGTGGCCGGGTAAGCCGGACTCCTCCCGTGAGTCCGGCTTGCCCGGCGCCTGACGGTCGCTCGTCCAGCGCCA CGCTGGCAGCGCAAGGCCCCTCGCCAGGGCCAGGAACAATCCCCTTCTTCCCTCCGGGGGAGAAGAACGGCCCGGCCAGACCGTGCCGGACCACCGCTTT CGCGTGCACCTCACGCCCCATATCCAGGCCGCCGAGACGGCCGCCAGACCAGGAGAGAGCAAGATGCTGAGCTGGGACGAATTCGACAAAGAAGACCCGA CCGAAGCCAAGGCCGCGCCCGCCGCCGCCCAGGCCGTTGCCCAGGGCCATGACAAGCTGGACGACGAAGCCGCCGGCTCGGTGGAAGAAGCGCGCGCCGT TTCCGCCGACGACTCCGACGCCGTCGCCCGCGCCAAGAAGGCCCTGAACGACCTCGACATCCAGGAAGGCCTGGACGATCTCGAAGGCTCCGCCGCGCGC
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Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit alpha
MHTDTTRENPQASAPQAADSSQDLAATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAVEGGTAAASSRIHDTVRRLTEQVTATFKRRMPSGGTIHIEE IQDQVELALMRAGEQKVARDYVIYREARAAERKNAGAASDVAQPHPSIRITRADGSLSPLDMGRLNTIISEACEGLAEVDGALIERETLKNLYDGVAEKD VNTALVMTARTLVEREPNYSYVTARLLMDTLRAEALGFLGVAESATHHEMAELYAKALPAYIEKGAEFELVDAKLKEFDLEKLGKAIDHERDQQFTYLGL QTLYDRYFIHKDGIRFELPQIFFMRVAMGLAIEEKDREARAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYGAIHDNAMLSKFAG GLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGS WTLFSPSDVPDLHDLYGKAFEERYEYYEALASYGKLKLHKVVQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIA VCNLGSINLVNHIVDGKLDTAKLEKTVKTAVRMLDNVIDINYYSVPQAQNSNFKHRPVGLGIMGFQDALYLQHIPYGSDAAIAFADQSMEAISYYAIQAS CDLADERGAYQTFQGSLWSQGILPIDSEKKLIEERGAKYIEVDLSETLDWAPLRERVQKGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSG EFTVINPYLVRDLKARGLWDPVMVNDLKYYDGSVQQIERIPQDLKDLYATAFEVETRWIVEAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWFRGL KTTYYLRALAATSTEKSTINTGKLNAVSAGGNDGLQAAPAAEPKPAPVPQACSIDNPDCEACQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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