Strain | Pseudomonas aeruginosa 2192 supercont1.1 genomic scaffold, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAGTTGCCAGCCATTGCGCGAGGTCATCGCGCAATGGCTGGCCTTGCTCAAGGAGTTCATCGCCATGCACCCGCAAGCGCCGCTGTCCGAAGAACAGCCC CCGGTCGCGGAGGCGGATGCCAGCGAAGGCGACGCGGACGGCGAGGAAAGCGTCCCGGCGAGCGCGCCGAGCGGGCCGGCTGGCGCGCCGACCAGTCGCG AGGACGCCTACCGGCAATTGCTGCTGATCGCTGACTACCTGGCGCGCACCGAGCCGCACAGCCCGGTTCCCTACCTGATCAAGCGCGCGGTGGAGTGGGG CAACAAGCCGCTGAGCGAGTTGCTGGCGGAGCTGATCAATGCGGACTCGGAGGCGCGCCGAGTCTGGTCGCTGCTTGGCGTACTGCCCTAATGAGCGGGG TTATATTTTTTATTCGAATATATAAATACGAATTCAGAATTTTTTAATCTATGGGTTCCTGGGGCAAGATGGGCGCACATTCCCCGGCTCGGAACCCAGC
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DNA Sequence for Gene |
>PA2G_01465
ATGTCCGTCATCACCCATCCCCACGCCCGCGAGCTGACCAAATCGGTGCGCGCCACCGTGCTGGTGTTCAACGACCCCCGTTCCCGCGAGCTGCTGGAGC GCATCGAGCGCCTGGCGCCCAGCGAGGCCAACGCGCTGGTCATCGGCGAGACCGGCACCGGCAAGGAGCTGGTGGCGCGCCATATCCACGCCCTCAGCGG ACGCAACGGCGGCCCGTTCGTCGCGGTCAACTGCGGTGCTTTCGCCGAGAGCCTGGTGGAGAGCGAGCTGTTCGGTCACGAGAAGGGCGCCTTTACCGGT GCGTTGCAGAGCAAGGCCGGCTGGTTCGAGGCAGCCAACGGCGGCACCCTGTTCCTCGACGAGATCGGCGACCTGCCGCCGAGCATCCAGGTCAAGCTGC TGCGCGTGCTGCAGGAACGCGAGGTGGTGCGGCTCGGTTCGCGCCGGCCGATCCCCATCGACGTGCGGCTGGTGGCGGCGACCAACGTCGACCTGGCTGA CGCGGTGGTCGCCGGACACTTCCGCGAGGACCTGTTCTACCGCCTGCACGTGGCGACCATCCAACTGCCGCCGTTGCGCGAGCGCCGCGGCGATATCCTG CCGCTGGCCGAGTACTTCATCGTCGAGCACTGCCGGCGCCTCGGCTACACCAGCGCGAGCCTGAGCCCGGAAGCCGAGCGCAAGCTGCTCGGGCATTCCT GGGCGGGCAATATCCGCGAGCTGGAGAACGCCATCCACCACGCGCTGCTGGTCTGCCGCAACCGTCTGATCCAGCCGGCCGACCTGCACCTCATCGACAT GCGTGCGCGCCAGGAGCCGAACGGCTTGCGCCGCGCTCCCGAAAGCGCCGCCGGCTCGGCGTTGGAGGCGGCGCTGCAGGCGCTGTTCGAGGAAAACCGC GAGGATCTCTACGAGCACATCGAGGAAACCGTGTTCCGTGCCGCCTATCGCTTCTGCCACGGCAACCAGTTGCAGACCGGACGCCTGCTGGGGATCAGCC GCAACATCGTGCGCGCCCGCCTGGAGAAGATCGGCGAGCTGGAAACCTCGCCACGACACAACGTGGTCTCGCTGGTGGGCAAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGTGGCGCTTTACAGTCTTTCACAATTCCCCCACAAAACCGGCAAGAACCCGGACGGCGGCTGTTCTACAACGGAGCGGTGAATCTCGTTGGCCGGACC AGGGACGTCGCCATGCCTCGCTCCGCTCGCCTGTGTCGCTCGCTCCCGGTAGCCGCTTTCCCGGCCGCGCCGAGTCCGCCCGGTCCTCCAGTCACAGCAA CCTTGGTTTCCCGACCCGGCGAAGAGGATCGCTGCATGCCGTACTGTTCGCCGGAACAACTCGCCGACCTAGGCCCGCTGCTGGATTGCCTGCGCCGCTG GCCGCGCATCCGCGAGCCGCGGCCGGGGGTGTTCTACCTGGGCGACCAGCCGTTCTGCCAGTTCCATTCGCGCAATGGCCAGCGCTGGGCCGACGTCAAG CGCCGCAAGGGGCGCCTGCCGCCGTTCGTTCTGCCGCCGGGCGACCAGCATTCGGCGCGGGCATTCCAGATATTCCTGCTCCAGGCCTACAAGCTGAACT
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Amino Acid Sequence |
>Fis family transcriptional regulator
MSVITHPHARELTKSVRATVLVFNDPRSRELLERIERLAPSEANALVIGETGTGKELVARHIHALSGRNGGPFVAVNCGAFAESLVESELFGHEKGAFTG ALQSKAGWFEAANGGTLFLDEIGDLPPSIQVKLLRVLQEREVVRLGSRRPIPIDVRLVAATNVDLADAVVAGHFREDLFYRLHVATIQLPPLRERRGDIL PLAEYFIVEHCRRLGYTSASLSPEAERKLLGHSWAGNIRELENAIHHALLVCRNRLIQPADLHLIDMRARQEPNGLRRAPESAAGSALEAALQALFEENR EDLYEHIEETVFRAAYRFCHGNQLQTGRLLGISRNIVRARLEKIGELETSPRHNVVSLVGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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