Pseudomonas putida S12, RPPX_RS25570
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S12, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCACCGGCCAGCAGCAAACCCACCGCTACGATGCCGTTATCCTCGCCACCGGCTACGAGCGCCGCTCGCACCGTGAATTGCTGGCGCCGCTGGCCGAT TACCTGGAGGACTTCAGCGTCGACCGCAACTACCGCGTACTGGCCAGCCCCGACCTGCAAGCCTCGGTGTACCTGCAGGGCTTCTGCGAAAACAGCCACG GCCTGAGTGACACCCTGCTTTCGGTCCTGCCAACCCGCGCTGCGGAAATTGGCCGAGCGCTGTACCAGGATCTGGAGCAGCTGCACGAAAAACCCCAAGC AGCAGTGGCGCTGACCCGCGCCTGACCCCTCTGCAACCCGCCATCAAGGCCGGACTGACGCCTCGTGCGCAGTCCGGTTTTTGTGCTTTGAAACATTTAG TTTCATTTTAACCTGCAGGTTTTCAATTCTCATTCGTCCTTATCAGTACAGCACTCTTTGGTTGGCACACGCTCGACCACCAATAGCAGAAGACCGTCTG
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| DNA Sequence for Gene |
>RPPX_RS25570
ATGGCCAAATCACCGAAAAAATCCAAATCCAGGCTGTGGTTCCTGGTCCACAGCTGGCTCGCCTTGCCGATCTGGTTCTTTGTCCTGATCGTCTGTTTCA CCGGCATGCTCGCCGTGGTCAGTCAGGAAATCGTCTGGCTCGCCGATCCGGCCGTGCGCGCCAACAAGCCAGACGCGAACACCGAGCGCATGAGCTTTCA GCAGGTACTGGAGGCCTTGAACAAGGCCGAGCCGGACATGGTGGTGGAGCGCCTGAGCCAGCCGGATGGTTCGCACTTCGCGGTAAAAGCTAATGTAACC CTGCCTGATGGCACCAGCCCGACGCTGTATGTAAACCCCTACACCGGAACCATTCAGGGCAAGACCCCAGACTTCAACTTCGAAGCCTTCACCCGCGCCC TGCACGGCTGGTGGCTGGTGCCGTTCACCAACGGTTTCAGTTGGGGCTGGTACCTGGTATCGCTGCTCGGCCTGCCGATGCTGGCCTCGCTGGTCACCGG CCTGGTGGTTTACAAGAAGTTCTGGAAAGGCTTTTTCAAACCCGTGCGTACCGGCCATGGTTCGCGAATCTTCTGGGGTGACCTGCACCGTCTGTCCGGG GTGTGGTCAATATGGTTCATTGCGGTCATTTCCATCACCGGCACCTGGTTCCTGATCCAGGCGATCCTGTTCGACAACCACATCACCATTTCCAGCCGAC CCATCGTGCCGGTGATCGCCCGTGAGGAGGTACCGCAAACGCCAGATGGCAGCCCCGCCTCGCGCATCGACCTGGACGAAGCGGCGCGCCTTGCCGGCCT GGCGATCCCGGGGCTGGAAGTGACCTCCATCTCGCTCCCCGCCACTGCCTACAGCCACGTCACGCTGTCTGGCCCGGGCTGGTACCCGTTGATGTTCCAG AGTGCTTCGGTGAATCCGTACACACGCAATGTCGACAGCCAGTTCCTGATCAGCGACCGTTCGGCCCTGGAGTTCGTCACCGAGTCCATGCGCCCGCTGC ACACCGGCGACTTTGGCGGTTTGCCGATCAAGCTGGTGTGGTTCTTCTTCGGCCTGATCCTCACCCTGATGGTGCTTAGCGGCCTGCTGATCTGGACCAA ACGCACCGCCCAGGCCACCGCCGCGGCCCTCAAGCGCAGCGAGCGCGCTCCACGTGCGGCACACAGTGAAACCACCGTGGAGATCCACTCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCAGGCCCTGCCCGCCAGCCCGCTGAAGCAGCTTTGGCTGAAGTGGCGTTTTCACCTGAACATCCTGCTGATCCTGATCCCGCTGGGCTTCATGCCCAA GTACTTCGCCGACGCCAGGCTGTTCCGCGGCGAGGCGGGCCTTGGCGCCAACGTGATCAGTGACATCCAGGTCGGCCCCTACAGCCTCGACCTAGCCGAA CTGCGTGACGAGGCGCCACGCGCCGACGGCCCGGCCGGCTACTTCAAATCGTTCAATGCAGCGTTGTGCAAGGCCTGCATAAAGGACGTCAAGGCCTCCT ACCTGCGCATCGGCAAGCCACGCAGCCTGCGCGCCGCCGGCACCATCTTCTTCGGTGCACCGTACAACATGGGCACCTCGTTGCCGATCCCGCCGCGCAC CAAACCCGATGCGCACATCTGGATCACCCTGGAAGGCTGGGACGGCAGCATGCACCAGGCGTCGATCCCCCTGGCCAAGGCATCGCCAGCCACCGTTGCA
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| Amino Acid Sequence |
>peptidase
MAKSPKKSKSRLWFLVHSWLALPIWFFVLIVCFTGMLAVVSQEIVWLADPAVRANKPDANTERMSFQQVLEALNKAEPDMVVERLSQPDGSHFAVKANVT LPDGTSPTLYVNPYTGTIQGKTPDFNFEAFTRALHGWWLVPFTNGFSWGWYLVSLLGLPMLASLVTGLVVYKKFWKGFFKPVRTGHGSRIFWGDLHRLSG VWSIWFIAVISITGTWFLIQAILFDNHITISSRPIVPVIAREEVPQTPDGSPASRIDLDEAARLAGLAIPGLEVTSISLPATAYSHVTLSGPGWYPLMFQ SASVNPYTRNVDSQFLISDRSALEFVTESMRPLHTGDFGGLPIKLVWFFFGLILTLMVLSGLLIWTKRTAQATAAALKRSERAPRAAHSETTVEIHS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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