Strain | Pseudomonas putida S12, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGTTGAAATAGACATTGCGTGCTTCGACCTTTGCACTGCCGTCTTCAAGAAACCCGGCAGCCTGGACGTTGACACCGGCACACAACAGAAACAGGCCGGT AACACGGCGCCCAGGGGCGAGGGGGAAAGGGGAAAACATGCGAGGAAACATCCAGAATGAAGACGATTTAACAACCTGTGGCACGTGTTGGCCACGGTAC TGCGGCAGGTCCGAACATGAGTCAGCCATCATCTGAAATGATCGCGCAAAGGCTCTGGCGCGGGCCATTGGACCATGGTCTAGGCCCCCTGTCGTGCAAC CGCAGAAAAACCGGCAAATACCGCGCGCAAAACTAGGAAAGTTCCCGCCTTACTTGCAAAAAGTTAGCAGTTTACCCAGTAGCGATGAATGACTACACTC GATATCAGCGAACAGTGGAACCCAACTGCGTGGCCGGCGTTTTTACGCGTCTTCAATGTTCGTCACGCCCTGCCACGACCGACGTACAGGAGTGATTACA
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DNA Sequence for Gene |
>RPPX_RS25505
GTGTCCAGACTTGCAGAGTTTCGTGCTGCCGAAAAAGCGCTCCAGGAACAGATGGCACAACTGGAAGCGTTGAAAAAGGATGCCGGCCTCAAACGCGAAA TCGAATTCGAGCAGAAACTAGTCGGCCTGATGAAAAGCTATGACAAGAGCCTGCGCGATATCATCGCCATCCTCGACCCGAAGGCTGTGGCCCGCGCTTC CAGCACATCGCCCAAGCAACAACGCCGCCCGCGGGTGGTCAAGGTCTATCAGAACCCGCACACCGGCGAGCGAATCGAGACCAAAGGCGGCAACCACCGC GGCCTCAAGGCCTGGAAAGAACAGTATGGGGCCGCCACGGTAGAAAGCTGGGTACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGAAATGCCCACACAGGCTTCACACTTTTTTCACAAGGGCTGGCTCAGTATCGAAACAGCTAAAGGACTAGCGACCCCATCACGCGCCCGCACATGCGGG CCTCTAATTTCAGCGCCCTGCCTTCGCAGGGCGCTTTCATTTGCGCAATCGGCGCACTGCCGTATCATGGCCAGCCTGTCTGTTTTGCCGGCGCCCTGTG CCCGGCCCCGTCTCAGGAGTTCCCATGAGCCTGCACGATCTGCAAACCCTGCCTGGCGTCACCGCGCAACCTGACGCCGCCACCGCCCAGTTCGTCTTCA ACCACACCATGCTGCGGGTCAAGGACATCGAGAAGTCGCTGGACTTCTACACCCGCGTGCTGGGCTTCCGCCTGGTGGACAAGCGTGACTTCCCTGAAGC CGCTTTCAGCCTGTACTTCCTGGCCCTGGTCGACCCTGCCCAGATCCCCGCTGACGACACCGCCCGCCACCAGTGGATGAAGGCGATCCCCGGCGTGCTG
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Amino Acid Sequence |
>transcriptional regulator
MSRLAEFRAAEKALQEQMAQLEALKKDAGLKREIEFEQKLVGLMKSYDKSLRDIIAILDPKAVARASSTSPKQQRRPRVVKVYQNPHTGERIETKGGNHR GLKAWKEQYGAATVESWVR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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