Pseudomonas putida S12, RPPX_RS20660
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S12, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAGCACAGCCTGCAAGGCGGTACCACTCACTGGCTGCGCCCGCGCCTGTTGGGCTACGCTGCCGCTCTGCTGGTCATGATCGGGGCACTGGTGGTGGCCC TGCAGATGCGCCCGATGGTATCGCTGGATGTGATCAAGGACCGCGGCCTGTTCCGCGAAAACGCCCAAGGCCAGATCGAGAACATTTACCTGCTCAAGGT CATCAACAAGACCGAACGTACCCAGCACTATCAATTGCGCCTGCTGGACGCTGACGGTTTCTCCCTGCAGGGCAATAACGCACTGGTCATCCCTGCTGGC GAAATGAGCGAACTGCCGGTGTCGGTGGCGATGCTCGCCGAGCGCCCGACCAGCAGCTCGCAGACGCTGAGCTTTGAAATCAGCGAGCGAGACGACCCCG CTATCCGCAGCGTCGCGCACAGTCGCTTCGTCGCCCCCATGAACCGCTGATCCCTTACACTCACGCCACCGTGCCTGCCAGGCTTGGACAGAAGGCCAGA
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| DNA Sequence for Gene |
>RPPX_RS20660
ATGAAACGCTACGAACGCTTCGCCGATGACATTGCCGAACTGATCCGCTCCGGGGTGCTGGGCCCCGGCCAGCGCGTACCGTCCGTGCGCTACGCCAGCC AGACCCATGGGGTCAGCCCGTCCACCGTTTTCCAGGCCTATTACCTGCTGGAACGGCGCGGGCTGATCCGCGCCCGGCCGCGCTCCGGGTATTTCGTCAA TGCCCACGTCCCGCGCCAGTTCAGCGAGCCGCAGGCGCTGCAGCCGGTGAGCGAGTCTACCGATGTCGACGTTAGCGCCTTGGTATTTTCGATCCTCGAC TCGATCAAGGACCCCAACACCATTGCCTTCGGCTCAGCCTTTCCCAGCCCTGAGCTGTTCCCGCTGCAACGCCTGTCACGCTCACTGGCCAGTGCCAGCC GCAGCATGGACCCGCGCATGGTGGTGACCGATCTGTCCCCCGGCAACCCGCAGCTGCGCCGGCAGATCGCCCTGCGCTACATGGTCGGTGGGCTGATGCT GCCGATGGAAGAGCTGTTGATCACCAACGGCGCACTGGAGGCCCTGAACCTGTGCCTGCAGGCCGTGACCCAGCCGGGCGACCTGGTCGCCATCGAGGCC CCGGCTTTCTATGCCTGCCTGCAGGTGCTGGAGCGGCTCAAACTCAAGGCCGTGGAAATCCCCGTGCATCCGCGTGAGGGCATGGACCTGGGGGTGCTGG CGCAGACCCTGGAAAAGCACCCGGTAAAGGCCGTGTGGTGCATGACCAACTTCCAGAACCCGGTAGGTGCAAGCATGCCGGAGGCCAAGAAACAGGCCCT GGTGGAGTTGCTGGCGCGCCATCAGGTGCCGTTGATCGAAGACGACGTGTACGCCGAGCTGTACTACTCGCAACAGGCGCCCAAACCCGCCAAGGCCTTC GACACCCAGGGCCTGGTCATGCACTGCGGCTCGTTCGCCAAAAGCCTGGCACCGGGCTATCGCATTGGCTGGGTGGCCGCCGGGCGCTTTGCGCAGAAGA TCGAGCGGTTGAAACTGATGACCTCCCTTTGTGCCTCCATGCCGGCCCAGGCGGCCATCGCCGACTACCTGCAACACGGCGGCTACGACCGCCACCTGCG CAAGCTGCGCTACGCGCTGGAGGGCCAGCAAGCCAACATGCTGGCAGCCATCGCCCGCCACTTCCCGGCGCAGACACGGGTCAGCCAGCCCTCCGGCGGC TACTTCCTGTGGCTGGAACTGCCCGAGCAGATGGACGCCCTCAAGCTGTTCCACATGGCCCTGGCCCAAGGCATCAGCATCGCCCCTGGGCCAATCTTTT CGCCCACCCGACGCTTTGGCAATTGCATCCGCCTGAACTACGGCAGCCCCTGGCATGACGGCGCCGAACAGGCCATGGAAACCCTCGGGCGGATCATTCG CTCGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TAGCCGGGGGCCCGAGGGGCGACTATAGTTGCTCGATCCGATCATCAGGCCCTCGTCATGTCGCCAGATACGCTTGCGTCCTTTGCCCAGTTGCAGGCGC GTGTCGCAGAACTGGAAGCACGCCTGGCAGAGCGCGAAGATAGCGTTCAGGCGCATGACAGGCTGCTTGGAGAACTGCTCGACAACAGCGTGGCCAACGT GTTTGCTGCCGACCGCAGGATGCGCCTGTTGGCCATCAATCGCACGGCGCGCGAAACCTTCAAACGTTACCGAGGCTTCGTACCGCAGATTGGCGACTAC GTACCCCAGTTCCTGACCGATCAACCCGACATCATGGGCCGCCTGGCCCCGATATGGCCGCGCATACTGGCAGGGGAAGCGTTCATCGACACCGTCACCT TCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCGATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACAT
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| Amino Acid Sequence |
>GntR family transcriptional regulator
MKRYERFADDIAELIRSGVLGPGQRVPSVRYASQTHGVSPSTVFQAYYLLERRGLIRARPRSGYFVNAHVPRQFSEPQALQPVSESTDVDVSALVFSILD SIKDPNTIAFGSAFPSPELFPLQRLSRSLASASRSMDPRMVVTDLSPGNPQLRRQIALRYMVGGLMLPMEELLITNGALEALNLCLQAVTQPGDLVAIEA PAFYACLQVLERLKLKAVEIPVHPREGMDLGVLAQTLEKHPVKAVWCMTNFQNPVGASMPEAKKQALVELLARHQVPLIEDDVYAELYYSQQAPKPAKAF DTQGLVMHCGSFAKSLAPGYRIGWVAAGRFAQKIERLKLMTSLCASMPAQAAIADYLQHGGYDRHLRKLRYALEGQQANMLAAIARHFPAQTRVSQPSGG YFLWLELPEQMDALKLFHMALAQGISIAPGPIFSPTRRFGNCIRLNYGSPWHDGAEQAMETLGRIIRSF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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