Pseudomonas putida S12, RPPX_RS18835

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida S12, complete genome. [Details]
DNA Sequence Upstream of Gene
GTGCCAACTGCTCGTTGCTGGTGGCCTTGGCCCCGATCAGGAGCCAGTCACAGGGCGGCATGTCGGCGGCACTGACGTAAGCCTGCACATTCATGTGCAG TGCGCCATGCACGGCACTGTCCAGGCTCAGTCCGCGCTCACAAACGGCCTGGTACTCGCTGCGCAACAGAAAATGCACATCGAAACCGGCCCGGGCCAGC ATCAATCCATAAAAGCCGCCGATGGCGCCACTGCCGATGATGCCGATGCGAGGGGGGTGCGAATGCATGACAATCTCCAGGTAAAGGGTCAGCACTCTTT TTACACAGGTTACGTAGCGCTGGGCAGTCCATACGCGCGCAACACCCTCGCTCAGGTAAAAACCCCACAATGACTGGGTTCAGCCCATTGTCGTGCCATC TGTAACGCGCTAAGGTTCGGCTCCCCGCTGCGATTATTCTTGCTGCTGGGCCGCACGGGGATAGTTGGCGGCCGGCACCCGTGACCTGACGAGTAACACG
DNA Sequence for Gene
>RPPX_RS18835
ATGGCTGATTTACCGATCGATGACTTGAACGTTGCCTCCAACGAGACCCTGATCACCCCTGATCAGCTCAAGAAGGAAATCCCCCTCAGCGCCAAGGCCC TGCAGACCGTGACTGCCGGCCGTGAAGTGGTGCGCAATATTCTCGACGGCAAGGACCATCGCCTGTTCGTCGTGGTCGGCCCTTGCTCCATCCACGACAT CAAGGCAGCCCACGAATACGCCGAGCGCCTGAAAGTGCTGGCCGAAGAAGTGTCCGATACGCTGTACCTGGTCATGCGCGTGTACTTCGAAAAGCCGCGC ACCACCGTCGGCTGGAAAGGCCTGATCAACGATCCGTACCTGGATGACTCGTTCAAGATCCAGGACGGCCTGCACATCGGCCGCAAGCTGCTGCTGGACC TGGCCGAAATGGGCCTGCCGACCGCCACCGAAGCGCTCGACCCGATTTCTCCGCAGTACCTGCAAGACCTGATCAGCTGGTCGGCCATCGGTGCCCGCAC CACCGAATCGCAAACACACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTTCAAGAACGGCACCGACGGCGGCCTGACCGTTGCCATCAATGCC CTGCAGTCTGTGTCCAAGCCGCACCGCTTCCTGGGCATCAACCAGGAAGGCGGCGTGTCGATCGTCACCACCAAGGGCAACCCATACGGCCACGTGGTAC TGCGCGGCGGCAATGGCAAGCCGAACTACGACTCGGTCAGCGTCGCCCTGTGCGAACAGGACCTGGCCAAGGCCAAGATCAAGGCCAACATCATGGTCGA CTGCAGCCATGCCAACTCCAACAAGGACCCGGCCCTGCAACCGCTGGTGATGGAGAACGTCGCCAACCAGATTCTGGAAGGCAACCAGTCGATCATCGGC CTGATGGTCGAAAGCCACCTGAACTGGGGCTGTCAGTCCATTCCGAAAAACCTGGACGATTTGCAATATGGCGTGTCGATCACGGACGCCTGCATCGACT GGTCGGCTACCGAGAAAACCCTGCGCAGCATGCATGCCAAGCTCAAGGATGTGCTGCCGCAGCGTAAGCGCGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACATTACGGGAATGAAAAACGCCGGGCACTGCCCGGCGTTTTTTGTTGTGTCTGGTGCCTGTCGTCAGCTCAGGCCTTGCTCGAATGCCGCTGCTGGCGC TCCATGTAACGCTCCACGTACGAGCAAGACGGGATCACCGTGTAACCCATCTGATCGGCGTACTCCAGAGCCCGCTCGGTCAGGGCGGCAGCGATCCCAC GGCCGCGCAGGGCGTTGGGCACGAAGGTGCGATAGATGTCCAGCGTCTGCTTGCCCAGATCCATGTACGTCAAGTAGGCACGATGACCGTCCACGTTGGT CTCGAACTGATGACCGGCCTGGTCATGGTGGATGGTCAGCGCTTCGCTCATCACTACTCCTCGCAGGTCTTCTCGGCAGACCCTTACCTTAACCGATGGT GGTTTATCCGGCACAGAATCCTCTACGCCACCTGTTGCCGCTTCGACCATTGGACGATTGTAATCGTTCGGATCGCCTGGCACTCACAAGATAGTAGGCA
Amino Acid Sequence
>phospho-2-dehydro-3-deoxyheptonate aldolase
MADLPIDDLNVASNETLITPDQLKKEIPLSAKALQTVTAGREVVRNILDGKDHRLFVVVGPCSIHDIKAAHEYAERLKVLAEEVSDTLYLVMRVYFEKPR TTVGWKGLINDPYLDDSFKIQDGLHIGRKLLLDLAEMGLPTATEALDPISPQYLQDLISWSAIGARTTESQTHREMASGLSSAVGFKNGTDGGLTVAINA LQSVSKPHRFLGINQEGGVSIVTTKGNPYGHVVLRGGNGKPNYDSVSVALCEQDLAKAKIKANIMVDCSHANSNKDPALQPLVMENVANQILEGNQSIIG LMVESHLNWGCQSIPKNLDDLQYGVSITDACIDWSATEKTLRSMHAKLKDVLPQRKRG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site