Pseudomonas putida S12, RPPX_RS15815

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida S12, complete genome. [Details]
DNA Sequence Upstream of Gene
GTCGGGCTTATGCAGCCGTGGCGATTTATCCGCATCACCCAGCGTGACCTGCGCGGGCGCATCCAGGCCTTGGTGGAGGCGGAGCGGGTACGCACGGCCG AGGCGTTGGGCGAGCGATCCGATGCCTTCATGAAGTTGAAGGTGGAGGGCATAAACGATTGTGCCGAGCTGCTGGTGGCGGCCTTGATGGACAACCGCGA GCCACACATCTTCGGCCGCCGCACCCTGCCGGAGATGGACCTGGCCTCGCTGGCTTGTGCCATCCAGAACCTGTGGCTGGCCGCGCGTGGCGAAGGGCTG GGCATGGGCTGGGTGTCGCTGTTCGACCCGCAGGCGCTGGCCGCGCTGCTGGGCATGCCCGCCGGGGCCAAACCGGTGGCGGTATTGTGCCTTGGGCCGG TCGCCGAGTTCTATCCGGTGCCGATGTTGGTGCAGGAAAGCTGGGCCGAAGAGCGGCCCCTGAGTGAAATGCTTTACGAAAACCAATGGGGAGAGCGTCA
DNA Sequence for Gene
>RPPX_RS15815
ATGAGCGTGGCCTTGCTGACCGTGGCCGGGGTGGCCCTGGACGCTTTGCTGGGCGAACCACAGCGCCGCCACCCCTTGGTGGCGTTCGGCAACATGGCCG GCAACCTGGAGCGCCGCCTGAATGCGGGCGGGCGCGGCTGGCGCAGCCACGGCGTGAGCGCGTGGTTTCTGGCGGTGGTGCCGCTTACTCTGGTGGCGCT GGTCCTTTCGTGGCTGCCGTATATTGGCTGGCTGGTTGACGTGCTGGCGCTTTACTGCGCCGTGGGGCTGCGCAGCCTGGGCGAGCATGTGCTGCCGGTG GCCAACGCCTTGCGCCAGGGCGACCTGGCGGAGGCACGGCACCGCGTTGGCTACCTGGTCAGCCGCGAAACGCGCGAACTGGACGAGCCAGCAGTGGCCC GAGCGGCGACCGAGTCGGTGCTGGAGAACGGCAGCGATGCAGTGTTCGCCGCGTTGTTCTGGTTTGTGGTGGCCGGTGCGCCCGGTGTGGTGCTGTACCG CCTGAGCAACACGCTGGATGCCATGTGGGGCTACCGTAACGAACGTTTCGAGCGTTTTGGCTGGTGTGCGGCGCGCATCGACGATGTGCTCAACTATATA CCTGCAAGGCTGGTGGCCCTGACTTATGCACTGTTGGGCAAGACCCGTCTGGCCCTGACCTGCTGGCGCAAACAGGGCCCGCTGTGGGACAGCCCCAACG CCGGGCCGGTGATGGCTGCCGGCGCTGGTGCGTTGGGCGTGACGCTTGGTGGCCCTGCGGTGTACCACGGCGAACTGCATGAGCGGCCGCGTCTGGGCGA GGGGCCAGTGGCCGATGCCGATGCCATCGAGCGCGGCTGGCAGCTGGTGCAGCGCGGCGTGTGGCTGTGGCTGCTGATGATTTGCCTGGGGGCCTATATC AATGCTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACATGGTGGCCGCCTGTTACGCGCGGTGCAGCAATACGGTATCCCCCGTGAGCAGTGGCTCGACCTGTCCAGCGGCATTGCGCCCTGGCCATTTCCTGTC CCGCCGATTCCCGTCGACGCCTGGGCCCGCCTGCCGGAAACCGAGGACGGCCTGGAGGACGCCGCGCGCGCGTATTACGGCGCCCGCCAGTTGCTGCCGG TAGCCGGCTCCCAGGCCGCTATCCAGGCCTTGCCGCTGCTGCGCACAACCGCCCGGGTAGGCGTGCTGACGCCGTGCTATGCCGAACACCCTTATGCCTG GCAACGGGCGGGGCACCAACTGCTGGCGCTGGATGAGGCGCAAGTCGAAGCTGCGCTCGACGGCCTCGATGTGCTGGTGCTGGTGAACCCCAACAACCCG ACCGGCCAACGGGTGTCGCGCGAACGCCTGCTGGCTTGGCATGCTCGCCTGGCTGCGCGCGGTGGCTGGCTGCTGGTCGACGAAGCATTCATGGACAACA
Amino Acid Sequence
>cobalamin biosynthesis protein CobD
MSVALLTVAGVALDALLGEPQRRHPLVAFGNMAGNLERRLNAGGRGWRSHGVSAWFLAVVPLTLVALVLSWLPYIGWLVDVLALYCAVGLRSLGEHVLPV ANALRQGDLAEARHRVGYLVSRETRELDEPAVARAATESVLENGSDAVFAALFWFVVAGAPGVVLYRLSNTLDAMWGYRNERFERFGWCAARIDDVLNYI PARLVALTYALLGKTRLALTCWRKQGPLWDSPNAGPVMAAGAGALGVTLGGPAVYHGELHERPRLGEGPVADADAIERGWQLVQRGVWLWLLMICLGAYI NA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site