Pseudomonas putida S12, RPPX_RS14875
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S12, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTCGCGGGTTGGCGTTCGGACTGGCTGCCACCCGGTTTCGAGCTGGTCAACAGCTCGGTACGCCGTGATCCCAAGCGCAACAGTTCGGTCAGCAGCCTGA TGTATGACGACGGCCTGGCGCGTTTTTCGGTGTTCATCGAGCAAGTGAGCGATGATGGCGGCACCGACATGCGTACCCAGCTAGGCCCGACCTCGGCAGT CTCGCGTCGCCTGAATACACCCAAGGGCAAAGTGATGGTGACCGTAGTTGGCGAAGTTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCC CAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAAT CCATCGGCAAATTTTCTATAGGTCAGGCTTTGAAGAGCCTGGCCTTTTCTGCGTTGTGCAGGGGTCTTTCCAAACTACCGCTCGTTGTGACGGGAGTCGT
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| DNA Sequence for Gene |
>RPPX_RS14875
ATGTCAATACCACGCTTGAAATCCTACCTAATGATGTTCGCCGCTGTGCTGATGCTCGGCCAAGTACTCACCGCCCAGGCCGAGGAAGCCCTGCCGGACT TCACCACCCTGGTGGAGCAGGCTTCGCCGGCGGTGGTCAACATCAGTACCAAGCAGAAACTGCCTGACCGCCGGATCGCCGCAAACCAGATGCCGGATCT GGAAGGCCTGCCGCCGATGTTCCGCGAGTTCTTCGAGCGCAACATGCCCCAGCAGCCGCGTTCGCCGCGCGGCGACCGCCAGCGCGAGGCGCAGTCGCTG GGCTCGGGCTTCATCATTTCCAGTGATGGCTACGTGCTCACCAATAACCATGTAGTGGCCGATGCCGACGAGATCATCGTCCGCCTGTCGGACCGCAGCG AGCTGCAGGCCAAGCTGGTCGGTACTGACCCGCGCACTGACGTGGCGCTGCTGAAAGTCGAGGGCAAGAACCTGCCGACGGTGAAGCTGGGTGACTCCGA GAAGCTCAAGGTGGGCGAGTGGGTGCTGGCCATCGGTTCGCCGTTCGGCTTCGACCATTCGGTGACCAAAGGTATCGTCAGCGCCAAGGGCCGGACCCTG CCCAATGACACCTACGTACCGTTCATCCAGACCGACGTGGCCATCAACCCGGGTAACTCCGGCGGCCCGCTGTTCAACATGAAAGGCGAAGTGGTGGGGA TCAACTCGCAGATCTTCACCCGTTCTGGCGGTTTCATGGGCCTGTCGTTCGCCATCCCGATCGATGTGGCGATCGATGTCTCCAACCAGCTGAAGAAAGA CGGCAAGGTCAGCCGCGGCTGGCTGGGCGTGGTGATTCAGGAGGTCAACAAGGACCTGGCTGAATCGTTCGGCCTGGACAAGCCGGCGGGCGCCCTGGTG GCCCAGGTGCTGGAAAACGGCCCGGCAGCCAAAGGCGGCCTGCAGGTGGGCGACGTGATCCTTAGCATGAACGGCCAGCCAATCGTCATGTCGGCCGATC TGCCGCACTTGGTAGGCGGCCTCAAGGATGGCGAGAAGGCCAAGCTGGAAATCATTCGCAATGGCAAGCGCCAGAACCTGGACATCAGCGTCGGCGCGCT GCCGGATGACGACGTTGACATTGGCGCTGGCACCGAAGGCAGCGCCGAGCGCAGCAGCAACCGCCTGGGTGTCTCGGTCGCCGACCTGACCGCCGAGCAG AAAAAATCCCTGGAGCTCAAAGGTGGTGTGGTCATCAAGGAAGTGCAGGATGGTCCGGCAGCCATGATCGGCTTGCGCCCGGGTGATGTCATCAGCCATC TGAACAACCAGGCCATCGGTTCGGCCAAGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAACCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCG TGCCAGCTTCATCACCTTCAAGCTTGCTGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGTTTCGCAAGGTGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATATTCACAATTGCGGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCC CATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAGTGTTGACCCGTGAGTGATTTGAGTCATAT CCGCAATTTCTCCATCATCGCCCACATCGACCATGGCAAGTCGACGCTGGCTGACCGTTTCATCCAGATGTGCGGTGGCCTGTCGGCGCGCGAGATGGAA GCCCAGGTGCTCGATTCCATGGACCTGGAGCGTGAGCGCGGTATCACCATCAAGGCCCACAGCGTCACGCTTCACTACAAGGCGCAGGACGGCAAGACCT ACCAGCTGAACTTCATCGACACGCCCGGCCACGTCGACTTCACCTACGAAGTCTCGCGCTCGCTGGCGGCCTGTGAGGGGGCACTGCTGGTGGTTGACGC
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| Amino Acid Sequence |
>serine peptidase
MSIPRLKSYLMMFAAVLMLGQVLTAQAEEALPDFTTLVEQASPAVVNISTKQKLPDRRIAANQMPDLEGLPPMFREFFERNMPQQPRSPRGDRQREAQSL GSGFIISSDGYVLTNNHVVADADEIIVRLSDRSELQAKLVGTDPRTDVALLKVEGKNLPTVKLGDSEKLKVGEWVLAIGSPFGFDHSVTKGIVSAKGRTL PNDTYVPFIQTDVAINPGNSGGPLFNMKGEVVGINSQIFTRSGGFMGLSFAIPIDVAIDVSNQLKKDGKVSRGWLGVVIQEVNKDLAESFGLDKPAGALV AQVLENGPAAKGGLQVGDVILSMNGQPIVMSADLPHLVGGLKDGEKAKLEIIRNGKRQNLDISVGALPDDDVDIGAGTEGSAERSSNRLGVSVADLTAEQ KKSLELKGGVVIKEVQDGPAAMIGLRPGDVISHLNNQAIGSAKEFTEIAKELPKNRSVSMRVLRQGRASFITFKLAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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